Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0813 ATGCCGACTCTAAGAATTCATGGATATGCCTTTGGTGTTTTGTGTTGTTTTATCATCCTCACAGAAGCTTCACAAACAGACCCTTCAGAAGTAAATGCACTGATAGACATCAAGAAAAGTTTGATTGATCCTAAGAACAATCTGAGGAACTGGAATTCGGGTGACCCGTGTATGGCAAACTGGACTGGAATTTATTGTTCTGATAGGGAGGAGGCTGATGGTTACTTCCATGTTCAAAAGCTCTACTTAATGACTATGAATCTCTCGGGAAGTTTAGCACCCCAGCTTGGTCAGCTATCTCATCTTAAGATACTGTCTTTTATGTGGAACAGTTTGACAAGCACAATACCGAAGGAAATTGGAAATATCTTGTCATTGGAACTCTTGCTCCTAAGTGGGAATAAGTTATCTGGTAGTTTGCCAGATGAACTTGGCAAACTTTCGAATTTGAATAGACTCCAAGTTGATGAAAATCAATTGTCAGGAACTATTCCAAAGTCATTTGGCAACATGGTCAAAGTTAAACATCTCCACATGAATAACAACTCCTTCTATGGTCAACTTCCTTCCACACTTTCAAATCTGTCTAATCTTGTGCATTTGCTTGTGGACAACAATAACTTATCTGGTTACCTTCCATCAGATTTCTATGTGTTACAATGGTTAAGAATACTCCAACTTGATAACAATAATTTCAATGGGCATGAAATTCCTTCAACCTATGAAAACTTCTCCGCTCTAACGAAACTAAGTCTGAGAAACTGCAGTCTGCAAGGAACTATTCCTGATTTCAGTTCAATAACCAACCTTATCTATTTAGACCTTAGCTGGAATCAGTTTACTGGAACTATACCATCAAATAGACTTGCAGACAATATGACTACTATTGATCTATCCAATAATTTTCTCGAAGGACCAATTCCTCTAAGCTTCATATACCCTAGGCTTCAAAAACTGTCACTTGAGAACAATTCTCTAAATGGATCAATCCCTGCTAGCATATGGCAGGACATGGCATTCATTACTAAAGATAAACTTAAAATTAATCTCGAAAATAACTCCCTAGTCAACGTTTTGGGAAATCTGAACCCCCCAGCAAATGTTACCTTGAGGCTTTCTGGCAATCCAATCTGCAAGAATTTTGACATAGAAAATATTGGTCAATATTGTGAACCTGGTGGAGATGAAGATGAAGATGAAATAGTCCAAAACCCAAAAGATCCATCAACTGTCTGTCTATTTCAAGATTGCCAAGTAGATAAGTCCTATGAATTATATGTACCCTCTTTCCCAATTCCTTGCTATTGTGCAGCTCCTCTGTTAGTTGGATACAGGCTGAAAAGTCCAAGTTTTTCATACTTTGCTCCCTATTTTGTGATGTTTGCATTATATATAACTGATTCCTTAAACTTAGAACACTATCAGATATCAATATCTTCTTGGGAAGATGGAAACCGTATCACCATGTATTTAAAACTATTCCCTTCGTATGATTCCCACTTAGATATGTTCAACGAAAGTGATGTCTATCGCATTAAAACCAAATTTACATCATGGGAATTTCCTCCCAATCATTTCTTTGGACCATATGAACTCCTGAACTTCACTCTTGTTGGACCTTATGCAACTACTATTGGTTCAAACGGGAGTACACTTAATTCAGTCATATTGCTTGCTGCTTTATTATCAGCTGTTGCCAGTATTTTAGCAACATCTGCTGTGATCATTTTCCTGCTTTATAGAAGACATGGAAAATATCAGCACATGAGTTCAAGGAAACATAAGTCCCCTAATGTACATATTAAAATAGACAGTGTGAAAGAATTTAGTTTCATAGAACTGGCTATTGCTACGAACAATTTTAGCAGCTCAACTATAGTTGGCAAAGGAGGTTATGGGGCTGTCCATAAAGGCATTTTATCTGGTGAAACACTTGTGGCTATTAAACGAGCAGCAGAAGGTTCCTTACAAGGCCAAAAGGAGTTTTTGACTGAGATTGAACTTTTATCAAGGTTACACCATCGAAATCTTGTCTCACTGATTGGATACTGTAATGAAGAAGAGGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGACTGGATTTCTGGTAAAAGTGAAAAAGCCAAGGAAAGACAAAATTTTGGTATGGGATTGAAAATTGCATTGGGTGCAGCCAAAGGCATACTATATCTTCATACAGAGGCTAACCCTCCTATATTCCACCGAGATATTAAAGCCAGCAACATACTTCTAGACTCTGAATTTACAGCTAAAGTGGCTGATTTTGGACTTTCACTGCTTGCACCAGAAGGATCTGGTACTAAACTGTCAACTGTTGTGAAGGGAACACCAGGTTACCTTGACCCAGAATATGTATTGACTCAGAAGTTTACTGACAAAAGTGATATCTATGGTCTAGGAATTGTGTTTCTGGAGCTTTTAACAGGCATGCAGCCAATCTCACGTGGGAAACACATTGTTAATGAGGTTAATGCGGCTTGTCGATCTGGCATGATATATTCCGTTATAGAGAGCAGAATGGGGTTATATCCATCACATTGCTTGGACAAGTTTTTATCTCTGGCCCTCAGATGTTGCCAAGAAAAACCAGAGGAGAGGCCATCAATGGTAGACGTGGTGAGGGAACTAGAAGATATTGCTGCAATGCCATCAAGAAGTCATGAAGCTAGTTTCCCAGATGTTAGCATAGATAACTCAGGTGAAATGGCATCCTCATCATCTTTAGGATCTAATGCAGCAAGGGAGGATCAATACAAGTACGTGCATGTGTCAGGAAGTAATCTTGTCAGTGGTGTCATTCCCACCGTTGTTCCTCGCTAA 2856 0.3883 MPTLRIHGYAFGVLCCFIILTEASQTDPSEVNALIDIKKSLIDPKNNLRNWNSGDPCMANWTGIYCSDREEADGYFHVQKLYLMTMNLSGSLAPQLGQLSHLKILSFMWNSLTSTIPKEIGNILSLELLLLSGNKLSGSLPDELGKLSNLNRLQVDENQLSGTIPKSFGNMVKVKHLHMNNNSFYGQLPSTLSNLSNLVHLLVDNNNLSGYLPSDFYVLQWLRILQLDNNNFNGHEIPSTYENFSALTKLSLRNCSLQGTIPDFSSITNLIYLDLSWNQFTGTIPSNRLADNMTTIDLSNNFLEGPIPLSFIYPRLQKLSLENNSLNGSIPASIWQDMAFITKDKLKINLENNSLVNVLGNLNPPANVTLRLSGNPICKNFDIENIGQYCEPGGDEDEDEIVQNPKDPSTVCLFQDCQVDKSYELYVPSFPIPCYCAAPLLVGYRLKSPSFSYFAPYFVMFALYITDSLNLEHYQISISSWEDGNRITMYLKLFPSYDSHLDMFNESDVYRIKTKFTSWEFPPNHFFGPYELLNFTLVGPYATTIGSNGSTLNSVILLAALLSAVASILATSAVIIFLLYRRHGKYQHMSSRKHKSPNVHIKIDSVKEFSFIELAIATNNFSSSTIVGKGGYGAVHKGILSGETLVAIKRAAEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEEEQMLVYEFMPNGTLRDWISGKSEKAKERQNFGMGLKIALGAAKGILYLHTEANPPIFHRDIKASNILLDSEFTAKVADFGLSLLAPEGSGTKLSTVVKGTPGYLDPEYVLTQKFTDKSDIYGLGIVFLELLTGMQPISRGKHIVNEVNAACRSGMIYSVIESRMGLYPSHCLDKFLSLALRCCQEKPEERPSMVDVVRELEDIAAMPSRSHEASFPDVSIDNSGEMASSSSLGSNAAREDQYKYVHVSGSNLVSGVIPTVVPR* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0813 951 CDD STKc_IRAK 627 891 - -
Pvu8g0813 951 ProSiteProfiles Protein kinase domain profile. 621 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0813 951 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Pvu8g0813 951 SUPERFAMILY L domain-like 237 384 - -
Pvu8g0813 951 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 925 - -
Pvu8g0813 951 Gene3D Phosphorylase Kinase; domain 1 590 696 - -
Pvu8g0813 951 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Pvu8g0813 951 SMART serkin_6 621 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0813 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Pvu8g0813 951 Gene3D Transferase(Phosphotransferase) domain 1 697 909 - -
Pvu8g0813 951 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 925 - -
Pvu8g0813 951 SUPERFAMILY L domain-like 25 286 - -
Pvu8g0813 951 Gene3D Ribonuclease Inhibitor 286 418 IPR032675 -
Pvu8g0813 951 Gene3D Ribonuclease Inhibitor 27 285 IPR032675 -
Pvu8g0813 951 Pfam Protein kinase domain 623 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0813 951 SUPERFAMILY Protein kinase-like (PK-like) 606 907 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0813 Pvu-Chr8 7678502 7689274 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0813 5 951 Receptor kinase-like Gene Family AT5G01950 55.266 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu8g0813 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0813 - - gmx:100798809 1426.77