Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0811 ATGCCTGCTCAGAGAATTCATGGATATGCCTTGGCTGTTTCGTTTTGTCTTATCACCTTCATAGCAGCATCACAACGAACAGACCCTTCAGAAGTTAATGCGCTGATAGACATCAAGAAAAGTTTGATTGATCCTAAGAACAATCTTAAGAACTGGAATAAAGGAGATCCATGTGCAAGAAACTGGACTGGAGTTTGGTGTTTTGATAAGAAGGGAGAGGATGGGTATTTCCATATTCGTGAGATCTACTTAATGACAATGAATCTTTCGGGAAGTCTATCACCTCAGCTTGGTCAGCTATCCCATCTTGAGATAATGGATTTCATGTGGAACAATCTGACAGGACCGATACCAAAGGAGATTGGAAATATCAAAACATTGAAACTCTTGCTCCTGAATGGCAATATGTTATCTGGGAGTTTACCAGACGAGCTTGGCAACCTTCTAAATATAAATAGATTCCAAGTAGACGAAAACCAATTGTCTGGTTCTATACCAGAGTCACTTGCCAACATGATTAATGTTAAACACCTTCACCTGAACAACAACTCATTTAGTGGTCAACTTCCATCCACACTTTCAAAGCTGTCAAATCTGATGCATTTGCTTGTGGACAACAATAACTTATCTGGCAATCTTCCACCAGAATACTCCATGTTAAATGGATTGGCAATACTCCAACTTGATAACAACAACTTCAGCGGGAATGGAATTCCTTCTACCTATGCAAACTTAACCAGGCTAGTGAAATTAAGTCTAAGAAACTGCAGTCTGCAAGGAGCTGTTCCTGATTTCAGTTCAATACCCAATCTTGCCTATTTAGATCTTAGCTGGAATCAGTTCACCGGACACTTACCGTCAAATAAACTGGCAGACAATATGAATACTATTGATTTGTCCAATAATCATCTCAACGGATCTATTCCTCGAAGCTACTCTTATCCTCATCTTCAAAAATTGTCACTTGCAAACAATTTACTGTCGGGGTCCATCCCTGCTAGCATATGGCAGAATATGTCCTTCAGTGTGAAGGATAAACTTCTAATTGATCTCCATAACAACTCGTTTGAGGATGTTTTGGGAAGTCTGAACCCCTCGGCAAATGTTACCTTGAGGCTTTCTGGTAATCCTATATGCAAGAATTCTAACACACAAAATGTTGGTCAATATTGTGGACCTGAAGGAGATAAGGCAGCCCAAGACTTAACAAACTCTACTCTCTGTCCTGTTCAATCTTGTCCAGTGAATGAGTTTTATGAATACGCCCCTTCTTCCCCAGTTCCTTGCTTTTGTGCGGCACCTCTGAGAATTGGATACAGGCTGAAAAGTCCAAGTTTTTCTTACTTTGATCCCTATAGATCTAGATTTGAACACTACATAACTGACTCCTTAAAGTTACACCTCTACCAACTATCAGTAGATTCGGTTGCCTGGGAAAAGGGACCTCGTCTTAGAATGTATCTGAAACTCTTCCCTTCCTATAATGATTCCCGTTCTAATGTGTTCAACGTAAGTGAGGTCCTTCGCATTAGCAGCATATTCACATCATGGCGATTTCCTCGCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTTCTTGGACCTTATGAAAATTTAATTATTCATTCGGAGAAGGAAAAAGTTAGTGTTGGCATAAAAGTTGCTGTTGTAATAGCAGCTGCTGCTTGTGCTTTAGCAATATCTGCAATAATCATTCTCCTGATTACTAGAAGAAAGATGAAATACCAGAAGAAGGTTTCCAGGAAACCTACTAGTATATCTATCAAAATAGATGACATGAAAGCATTTACTTACAAAGAACTGGCTGTTGCTACTAACAAATTTAATATCTCGACTAGAGTTGGTCAAGGAGGTTATGGGAATGTCTATAAAGGCATTTTATCTGATGAAAGCTTTGTGGCCGTTAAGCGAGCAGAAGCAAGTTCCTTACAAGGAGAAAGGGAGTTCTTGACTGAGATTGAGCTTTTGTCAAGGTTACACCATCGAAATCTTGTCTCGCTGATTGGATACTGTAACGAAGAAGGGGAGCAGATACTGGTTTATGATTTCATGCCCAATGGCACTCTAAGGGACTGGATTTCTGGTAGAAGAAGAAAAACCAGGGGCAGCCTAAATTTTAGTATGAGGTTGAGAATTGCAATGGGAGCAGCCAAAGGCATACTGTATCTGCATACAGAGGCTAACCCTCCTATATTCCACAGAGATATTAAAGCCAGTAACATTCTTCTGGACTCCAAGTTCACAGCTAAAGTGGCCGATTTTGGACTGTCACGGCTTGTACCAGACTTAGATGAAGAAGGAACTGCTCCTAAATATGTGTCAACAGTTGTGAGAGGAACTCCAGGTTACCTGGACCCAGAATATTTGTTGACTCATAAACTGACAGACAAATGTGATGTCTATAGCCTGGGAATTGTGTATCTAGAGCTTTTAACAGGCATGCAACCAATATCTCATGGGAAAAACATTGTCCGCGAGGTTAACATGGCTCTTCAATCTGGCACAGTATATTCCATCATAGACAGCACAATTGGGTTGTACACATCTGAATGCTTGGACAAATTCTTAACTCTGGCCCTCAGTTGTTGCCAAGACAATCCAGAGGAAAGACCATCAATGGTAGATGTGGTGAGGACACTGGAAGATATCATTGCAATGTTGCCCGAAGCTGAAACTATTTTCTCAGATGTTAGCTTAGACAGTTCTGGCAACATAGCACCACCCTCATCATCAGCATCAACAACAGGATCTCATGTAATAAGGGAGGAGCAAAACATGTCCTCATATGTGTCAGGAAGCGATCTTGTGAGTGATGTCATTCCCACCATTGTTCCTCGCTGA 2871 0.4072 MPAQRIHGYALAVSFCLITFIAASQRTDPSEVNALIDIKKSLIDPKNNLKNWNKGDPCARNWTGVWCFDKKGEDGYFHIREIYLMTMNLSGSLSPQLGQLSHLEIMDFMWNNLTGPIPKEIGNIKTLKLLLLNGNMLSGSLPDELGNLLNINRFQVDENQLSGSIPESLANMINVKHLHLNNNSFSGQLPSTLSKLSNLMHLLVDNNNLSGNLPPEYSMLNGLAILQLDNNNFSGNGIPSTYANLTRLVKLSLRNCSLQGAVPDFSSIPNLAYLDLSWNQFTGHLPSNKLADNMNTIDLSNNHLNGSIPRSYSYPHLQKLSLANNLLSGSIPASIWQNMSFSVKDKLLIDLHNNSFEDVLGSLNPSANVTLRLSGNPICKNSNTQNVGQYCGPEGDKAAQDLTNSTLCPVQSCPVNEFYEYAPSSPVPCFCAAPLRIGYRLKSPSFSYFDPYRSRFEHYITDSLKLHLYQLSVDSVAWEKGPRLRMYLKLFPSYNDSRSNVFNVSEVLRISSIFTSWRFPRTDFFGPYELLNFTLLGPYENLIIHSEKEKVSVGIKVAVVIAAAACALAISAIIILLITRRKMKYQKKVSRKPTSISIKIDDMKAFTYKELAVATNKFNISTRVGQGGYGNVYKGILSDESFVAVKRAEASSLQGEREFLTEIELLSRLHHRNLVSLIGYCNEEGEQILVYDFMPNGTLRDWISGRRRKTRGSLNFSMRLRIAMGAAKGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSRLVPDLDEEGTAPKYVSTVVRGTPGYLDPEYLLTHKLTDKCDVYSLGIVYLELLTGMQPISHGKNIVREVNMALQSGTVYSIIDSTIGLYTSECLDKFLTLALSCCQDNPEERPSMVDVVRTLEDIIAMLPEAETIFSDVSLDSSGNIAPPSSSASTTGSHVIREEQNMSSYVSGSDLVSDVIPTIVPR* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0811 956 SMART serkin_6 618 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0811 956 CDD STKc_IRAK 624 893 - -
Pvu8g0811 956 Gene3D Phosphorylase Kinase; domain 1 579 693 - -
Pvu8g0811 956 Gene3D Transferase(Phosphotransferase) domain 1 694 905 - -
Pvu8g0811 956 ProSiteProfiles Protein kinase domain profile. 618 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0811 956 Pfam Protein kinase domain 619 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0811 956 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Pvu8g0811 956 Gene3D Ribonuclease Inhibitor 30 153 IPR032675 -
Pvu8g0811 956 Gene3D Ribonuclease Inhibitor 154 222 IPR032675 -
Pvu8g0811 956 SUPERFAMILY L domain-like 27 287 - -
Pvu8g0811 956 Gene3D Ribonuclease Inhibitor 223 417 IPR032675 -
Pvu8g0811 956 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 926 - -
Pvu8g0811 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Pvu8g0811 956 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 926 - -
Pvu8g0811 956 SUPERFAMILY Protein kinase-like (PK-like) 603 912 IPR011009 -
Pvu8g0811 956 SUPERFAMILY L domain-like 265 380 - -
Pvu8g0811 956 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0811 Pvu-Chr8 7653464 7662217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0811 4 902 Receptor kinase-like Gene Family AT5G01950 60.044 0.0 1083
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu8g0811 Pkinase 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0811 - - gmx:100815005 1580.84