LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g0791	ATGCCTTCCAACAACCTCATCTTTCGTATCTTTTGTTGTATCCTTGTTATTACCTTCTTCAACTTCCCAACCACTAAAGCACAGAATGAGGACAGGGTTTATTTTGAGCACCAAAACTGCAGTGCAAACATATCTTTGCCCAGCACCTATCAAAACAACTTGATAACCCTTTTCTCTTCCTTCACTTCCAACGCTTCTGCTAAATTATTCTACAACACCACGATCCTTGGCGGAAACAGTAGCGTGTATGGTATGTTCATGTGTAGGGGTGACATACCCTTACGCCTGTGCAAACAATGCGTGGGGAACGCAACCCAGAAGTTATCTACAGACCCAGAATGTAACCAGTCCATAGAGGGTTTTATGTGGTACGCTGAATGCAAGCTTCGGTATTCCAACGTGTCTTTCTTCTCCATCGTGGCTACATCTCCAGAATATGCTTTGTTTAACAATAACAATGTCTCCTCCAACTCCACAATTAGCTTCATGAACTTCTTGCGCAATACAATGAACCAAACTGCAGAAGCAGCAGCGGATTCGGAAGCAAGGTTCTCAACAAAGGAAGCAAACTTGTCTCGTTCTCAGACCCTTTACGCTCTCGCTCAGTGCACACAAGATTTGTCACCGCAAAACTGCAGAACTTGTCTTGCTGAAGGAATAAAGATTCTTCCAACGTGCTGTGATGGAAAACAAGGAGCAAGAGTTATTTTTCCGAGTTGTAACATTTGGTATGAGATGTACCCTTTCTATGGCCTCGTCACGGATAATATTCCACCAAAAACACTCGTTCCATCACCAGGTTTTTCTTCTTCTTCTTCATCTTCTTCTTATCAAACACGAACTATTATCTTGATCCTTATTTCCATTATCATTTTATTGGGACTACTTTTTGGCATTTGTTATAGTTTGATGCGAAGAAAAACAAAAAAGAGTAATAAAGTTATTCTCAGAGAAAATTTTGGACTTGGAAGTTCCACAATCGAGTCACTGCAGTTCAATCTGGCACTAATTGAAGCAGCAACGAACAACTTTGCAGATGACAATAAGATAGGGAAAGGTGGATTTGGAGAAGTTTACAAGGGCATTCTTATTGATGGAACCTCTATAGCTGTAAAAAGACTTTCAAGAAATTCCAAACAAGGTTTAGAGGAGTTCAAAAATGAGGTTTTGTTGATATCCAAACTCCAACATAGAAATTTAGTGACTTTCATGGGATTTTGTGTTAATGAGGAAGAGAAAATACTTATCTATGAATACGTGACACACAAGAGCTTGGACTACTTCTTATTTGATACTAAACAAGAAAAGTTTTTGACCTGGCCTGAGCGTTACAAGATAATAGAAGGGATTGCTAAAGGAATTCTATATTTACATGATCATTCTCGACTTAAAGTTATACATCGTGATCTCAAACCTAGTAATATACTATTAGATGAAAATATGAATCCAAAAATTTCAGATTTTGGTCTTGCTAGAATTGTTGAAAAAGATCAACAAGAAGGAAGTACAAAGAGAATTACTGGAACATATGGTTATATGTCTCCAGAGTATGCTGTGTTTGGACAATTTTCTGAGAAATTAGATGTTTACAGTTTTGGAGTTATGGTTCTCGAGATTATTAGTGGAAGAAAGAACATAGGTTCATATGAACCACATCGTATTGTTAATTGTCTTTTAAATTTTGTTTGGGAGCATTGGAGGGATGAAACGCCATTGAGTACATTAGATCCAAGGTTGAAAGAAAATCATTCTAATATTGAAGTCATCAGATGTGTTAAGATTGGTTTATTATGCGTTCAAGAAAATCCAGATGTTAGACCTACAATGTTGACTATTGTCTCATATCTCAATGGTCACTTAGTTGAATTGCCTTCTCCTGTAGAACCAACATTTTCTTTGAATCGGGAAACAAATCCAATTGTTGCATATGAATCAAATTTAAGACAATCAACCTCAAACAATGAGATGTCTGTAAGTAAATTGTATCCTCGATAA	1995	0.3724	MPSNNLIFRIFCCILVITFFNFPTTKAQNEDRVYFEHQNCSANISLPSTYQNNLITLFSSFTSNASAKLFYNTTILGGNSSVYGMFMCRGDIPLRLCKQCVGNATQKLSTDPECNQSIEGFMWYAECKLRYSNVSFFSIVATSPEYALFNNNNVSSNSTISFMNFLRNTMNQTAEAAADSEARFSTKEANLSRSQTLYALAQCTQDLSPQNCRTCLAEGIKILPTCCDGKQGARVIFPSCNIWYEMYPFYGLVTDNIPPKTLVPSPGFSSSSSSSSYQTRTIILILISIIILLGLLFGICYSLMRRKTKKSNKVILRENFGLGSSTIESLQFNLALIEAATNNFADDNKIGKGGFGEVYKGILIDGTSIAVKRLSRNSKQGLEEFKNEVLLISKLQHRNLVTFMGFCVNEEEKILIYEYVTHKSLDYFLFDTKQEKFLTWPERYKIIEGIAKGILYLHDHSRLKVIHRDLKPSNILLDENMNPKISDFGLARIVEKDQQEGSTKRITGTYGYMSPEYAVFGQFSEKLDVYSFGVMVLEIISGRKNIGSYEPHRIVNCLLNFVWEHWRDETPLSTLDPRLKENHSNIEVIRCVKIGLLCVQENPDVRPTMLTIVSYLNGHLVELPSPVEPTFSLNRETNPIVAYESNLRQSTSNNEMSVSKLYPR*	665

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g0791	664	Pfam	Salt stress response/antifungal	42	133	IPR002902	-
	Pvu8g0791	664	Pfam	Salt stress response/antifungal	157	246	IPR002902	-
	Pvu8g0791	664	Gene3D	Phosphorylase Kinase; domain 1	304	419	-	-
	Pvu8g0791	664	Gene3D	Transferase(Phosphotransferase) domain 1	421	623	-	-
	Pvu8g0791	664	Pfam	Protein tyrosine and serine/threonine kinase	348	615	IPR001245	GO:0004672\|GO:0006468
	Pvu8g0791	664	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	23	255	-	-
	Pvu8g0791	664	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	272	652	-	-
	Pvu8g0791	664	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	272	652	-	-
	Pvu8g0791	664	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	23	255	-	-
	Pvu8g0791	664	ProSiteProfiles	Protein kinase domain profile.	344	631	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g0791	664	ProSiteProfiles	Gnk2-homologous domain profile.	32	136	IPR002902	-
	Pvu8g0791	664	ProSiteProfiles	Gnk2-homologous domain profile.	142	249	IPR002902	-
	Pvu8g0791	664	CDD	STKc_IRAK	350	618	-	-
	Pvu8g0791	664	SUPERFAMILY	Protein kinase-like (PK-like)	327	649	IPR011009	-
	Pvu8g0791	664	SMART	serkin_6	344	616	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu8g0791	664	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	465	477	IPR008271	GO:0004672\|GO:0006468
	Pvu8g0791	664	ProSitePatterns	Protein kinases ATP-binding region signature.	350	372	IPR017441	GO:0005524
	Pvu8g0791	664	Gene3D	-	142	249	IPR038408	-
	Pvu8g0791	664	Gene3D	-	32	136	IPR038408	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu8g0791	Pvu-Chr8	7475754	7481401	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu8g0791	14	664	Receptor kinase-like Gene Family	AT4G05200	43.620	0.0	530

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pvu8g0791		PK_Tyr_Ser-Thr	1.3e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g0791	-		-	gsj:114397380	894.419