Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0789 ATGAGCTGGAATCCCTTCAAGTTCATCTTCCTTTGTATTATCTTCTTCATTTTCGCAACTCGTCAAGCAAAGGGCGCTGATTATATTTACCGAGTTTGCAGTGAAGAAGACAGAAGCAGTGACAACAGCCCCTATCAGACGAACCTCAGGACCCTCTTCTCTTCCTTATCTTCCAAAGCTAAAGCCAACGGCGATGAAGTCTACGTCGATACAATCCTTGGCACAAACTCCTCTGACACAGTATATGGTCTTTTCATGTGCAGGGGTGATCTTCTCCCCGACGCCTGCAAAGATTGTGTGGCAAACGCAAACCAGACTTTATCTTCAGACACAAACTGTTCCCTGTCCAAATCGGGTCTGATTTGGTACGCCGAGTGCATGGTACGATATTCCAACCTCTCTTTCTTCTCCACTGTGGACACAACTCCCGGATATTATGTTTGGAACGTGGCCAATATCTCCTCCAACTCATCAATCTTCAATAGTTTATTGGACAACACCATGAAAGAAACTGCAGATGAAGCAGCCATTTCCAGTAAGAGGTATTCCGCAAAGCAAGCAAACTTATCTGAAAATCAGACCCTTTACTGTCTAACTCAGTGCACACAAGACCTTTCACTCCAACAATGCTCAGACTGTCTTGGTGAAGCAATATCAAGAATTCCGGCTTGCTGTGATGGAAAAATAGGAGGAAGAGTTTTGTTTCCCAGTTGTAACATTAGGTATGAACTATACCCTTTCTACAGCGTTACCGATGATGCACCACAAGGACTTGTCCCAGAAACAACATATGCATACACAGATTCTGAATATTCAGAAGATCCCGGCTATATTTCTCACAACTGCTCAAACAGCAACTCTGACGCTGCTTTCCGATCAAACCTCAGAACCCTCTTCTCTGCCTTGTCTTCCAACGCCACCTCTAGCTATGGATTCCAGACGCCAGAGGGAACAGCGTATGGCCTCTTCAGGTGCCGTATCGACATTTCTCATCGCCTCTGTGAACTATGCATCCAAAACTCAACAGACAAATTAACCTCCGAGTGCGGTTTGGCTTCTACGGAGGCCATAATATGGTACAATCACTGCTGGCTTCGCTATTCCGACAAAAACTTCTTCTCCAGCACCGAAACAAGTCCGAGATTTGTGAATCTGAACATCAGCAACAGCAATCTGATACAGTCCTCCGTTGCTACTAAGTTATCGAACCAGTTAGCTAAGGTAGCTAACATGATAGGGAATACTGATAACAAATTCCTAACAGATGAATCTTTGAGATTGAATGATAAGCAAACAGTGTTTATTCTTGGTCAATGCTCATCGGATCTATCAACCGATGGTTGCAATGGGTGCCTAAATGATGTGATTGGAACAGCAATTCAATGGAGCAGTCTGGGAAGCTTAGGTGGACGAGTTCTGTATCCTAGCTGTATTCTTCGCTTTGAACTGTTCAAGTTTTACAGTCTCACGCCTACTCCTCCCCCAACTGCTACTCCTCATCCCCCACCAGTTGGGCAAGAAAGTTCCACTATAGAGTCACTACAATTTAATCTGCCAATAATTGAAGCAGCAACAAGTAATTTCTCGCAGGAGAACAAAACTGGAAAAGGTGGATTTGGAGAAGTTTACAAGGGCATCCTTTATGATGGACGATGTATTGCTGTAAAGAGACTCTCAAAAAATTCTAAACAAGGCATTGAAGAGTTCAAAAATGAGGTTTTATTAATAGCCAAACTTCAACATAGGAATCTAGTGGCATTCATAGGATTTTGTCTTGATGAACAAGAAAAAATACTTATTTATGAATATGTGCCAAACAAGAGTCTAGACTACTTCTTATTTGATATTAAACAAGAAAATGTTTTGAGTTGGATTGAGCGTCACAAAATCATAGGTGGTATTGCTCGAGGAATTCTATATTTACATGAACATTCTCGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAATATACTACTAGATGAAAATATGAATCCAAAAATTTCAAATTTTGGACTTGTTAGAATTATTGAAATAGATCAAGAGGAGGAAATGGCTATGTCTCCGGAGTACGCCATGTTTGGACAATTTTCTGAGAAATCTGATGTTTATAGTTTTGGTGTTATGATTCTTGAGATTATTAGTGGAAAAAAGAATATGAGCTCACATGAATCACATCATGTAGCCGATGGACTTCTAAATTTTGTTTGGAGAAATTGGAGGGATGAAACAACATTAAATGCATTAGACCCAAAATTAAAAGAAAATTATTCTAATGTTGAGGTCATGAGATACATTCAAATTGGTCTATTATGTGTTCAAGAAAATCCAGATGTCAGACCCACAATGGTAACAATTGTTTCATATCTTAGCAGTCACACAATTGAGTTGCCATTTCCACAAGAACCTACTTTTTTCTTAAATCATAGAACAAATCCAATTGTTGCATGTGAATCAAGTTCAGGCCAAGATGCCAACACTTTCATACCATCTTCTACTAATAACATATCTATAAGTGGATTTTATCCTCGATAG 2538 0.3999 MSWNPFKFIFLCIIFFIFATRQAKGADYIYRVCSEEDRSSDNSPYQTNLRTLFSSLSSKAKANGDEVYVDTILGTNSSDTVYGLFMCRGDLLPDACKDCVANANQTLSSDTNCSLSKSGLIWYAECMVRYSNLSFFSTVDTTPGYYVWNVANISSNSSIFNSLLDNTMKETADEAAISSKRYSAKQANLSENQTLYCLTQCTQDLSLQQCSDCLGEAISRIPACCDGKIGGRVLFPSCNIRYELYPFYSVTDDAPQGLVPETTYAYTDSEYSEDPGYISHNCSNSNSDAAFRSNLRTLFSALSSNATSSYGFQTPEGTAYGLFRCRIDISHRLCELCIQNSTDKLTSECGLASTEAIIWYNHCWLRYSDKNFFSSTETSPRFVNLNISNSNLIQSSVATKLSNQLAKVANMIGNTDNKFLTDESLRLNDKQTVFILGQCSSDLSTDGCNGCLNDVIGTAIQWSSLGSLGGRVLYPSCILRFELFKFYSLTPTPPPTATPHPPPVGQESSTIESLQFNLPIIEAATSNFSQENKTGKGGFGEVYKGILYDGRCIAVKRLSKNSKQGIEEFKNEVLLIAKLQHRNLVAFIGFCLDEQEKILIYEYVPNKSLDYFLFDIKQENVLSWIERHKIIGGIARGILYLHEHSRLKVIHRDLKPSNILLDENMNPKISNFGLVRIIEIDQEEEMAMSPEYAMFGQFSEKSDVYSFGVMILEIISGKKNMSSHESHHVADGLLNFVWRNWRDETTLNALDPKLKENYSNVEVMRYIQIGLLCVQENPDVRPTMVTIVSYLSSHTIELPFPQEPTFFLNHRTNPIVACESSSGQDANTFIPSSTNNISISGFYPR* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0789 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Pvu8g0789 845 CDD STKc_IRAK 535 791 - -
Pvu8g0789 845 Pfam Protein tyrosine and serine/threonine kinase 531 791 IPR001245 GO:0004672|GO:0006468
Pvu8g0789 845 SMART serkin_6 528 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0789 845 ProSiteProfiles Gnk2-homologous domain profile. 141 247 IPR002902 -
Pvu8g0789 845 ProSiteProfiles Gnk2-homologous domain profile. 273 372 IPR002902 -
Pvu8g0789 845 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 19 258 - -
Pvu8g0789 845 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 505 833 - -
Pvu8g0789 845 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 268 491 - -
Pvu8g0789 845 Gene3D - 276 372 IPR038408 -
Pvu8g0789 845 Gene3D - 381 486 IPR038408 -
Pvu8g0789 845 Gene3D - 25 135 IPR038408 -
Pvu8g0789 845 Gene3D - 141 247 IPR038408 -
Pvu8g0789 845 ProSiteProfiles Gnk2-homologous domain profile. 378 486 IPR002902 -
Pvu8g0789 845 SUPERFAMILY Protein kinase-like (PK-like) 511 818 IPR011009 -
Pvu8g0789 845 ProSiteProfiles Gnk2-homologous domain profile. 27 135 IPR002902 -
Pvu8g0789 845 Gene3D Transferase(Phosphotransferase) domain 1 604 798 - -
Pvu8g0789 845 ProSiteProfiles Protein kinase domain profile. 528 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0789 845 Pfam Salt stress response/antifungal 282 369 IPR002902 -
Pvu8g0789 845 Pfam Salt stress response/antifungal 401 482 IPR002902 -
Pvu8g0789 845 Pfam Salt stress response/antifungal 33 132 IPR002902 -
Pvu8g0789 845 Pfam Salt stress response/antifungal 155 245 IPR002902 -
Pvu8g0789 845 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 258 - -
Pvu8g0789 845 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 505 833 - -
Pvu8g0789 845 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 268 491 - -
Pvu8g0789 845 Gene3D Phosphorylase Kinase; domain 1 504 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0789 Pvu-Chr8 7450471 7453907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0789 272 845 Receptor kinase-like Gene Family AT4G23140 40.089 4.85e-145 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g0789 PK_Tyr_Ser-Thr 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0789 - - pvu:PHAVU_008G077500g 1488.4