Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0788 ATGTTTTCCATTATTATACACCACACGAAAACTATGAGAGTGTTGTGGAAGATGAAGAGAAGCATGGCCTGGAATCCCTTCAAGCTCATCTTCCTTTGTTTTACCTTCTTCATTTTCGCAATTCCTCAAGCAAAGGGCGCTGATTATCTTTACCGAGTTTGCAGTGAAGAAGACAGAAGCAGTGACAACAGCCCCTATCAGACGAACCTCAGGACCCTCCTCTCTTCCTTATCTTCAAACGCTACAGCCAACGCTAATGGATTCTACAACAATACAATCCTTCCCACAAACTCTTCTGACACAGTATATGGCCTTTTCATGTGCAGGGGTGATCTTCTCCCTCACGCCTGCAAAGATTGCGTGGCAAACGCTACCCAGACTCTGTCGTCAGACGCAAACTGTTCCCTGTCCAAATCGGGTCTGATTTGGTACGACGACTGCATGGTTCGGTATTCCAACCTCTCTTTCTTCTCCACTATCAACACAACTCCCACAATTTGTGTTTGGAACAAGGCCAATATCTCCTCTGACTTATCAAGCTTCAATAGTTTGTTGGCCAGCACCATGAGAGAAACTGCACATGAAGCAGCCAATTCCAGTAAGAGGTATTCCGCAAAGCAAGAAAACTTATCTGAAAATCAGACCCTTTACTGTCTAACTCAGTGCACACAAGACCTTTCACCTCAACAATGCTCACAATGTCTTGATGATGCAATATCAAATATTCCGACATGCTGTAATGGAAAACAAGGAGGAAGAGTTTTGTTTCCTAGTTGTAACATTAGGTATGAACTGTACCCTTTCTACCGCGTCACCGATGATGCACCACAAGGACCTGTCCCAGAAACAACATATGCATACACAGATTCTGAATATTCAGAAGATCCCGGCTATATTTCTCACAACTGCTCAAACAACAACTCTGACGCTGCTTTCCGATCAAACCTCAGAACCCTCTTCTCTGCCTTGTCTTCCAACGCCACCTCTAGCTATGGATTCCAGACGCCAGAGGGAACAGCGTATGGCCTCTTCAGGTGCCGTATCGACATTTCTCATCGCCTTTGTGAACTATGCATCCAAAACTCAACAGACAAATTAACCTCCGAGTGCGGTTTGGCTTCTACGGAGGCCATAATATGGTACAACCACTGCTGGCTTCGCTATTCCGACAGAAACTTCTTCTCCATCACCGAAACAAGTCCGAGATTTGTGAATTTGAACATCAGCAACAGCAATCCGATACAATCCTCCGTTGCTTCTGAGTTATCGAACCAGTTAGCAAAGGTGGCGACCATGACAGGGAACACTGATAACAAATTCCAAACAGATGATTCTCTGAGATTGAATGATAAGCAAACAGTGTTTATTCTTGGTCAATGCTCATCGGATCTATCAAGCAATAGTTGCATTGGGTGCCTAAATGATGTGATTGGAACAGCAATTCCATGGAGCAGTCTGGGAAGCTTAGGTGGACGAGTTATGTATCCTAGCTGTATTCTTCGCTTTGAACTGTTCCAGTTTTACAGTCTCAAGCCTACCCCACCAACTGCTACTCCTCCCCCACCAGGAGAAAGTCAGCAAAGAACAATTATCTTGATCGTTACTTCGAGCATAATTGCAACAGGGATACTTTTCACCTTTTGTTATTATTTTATACGAAAAAAAACTCGAAAAAATAGTAGAACTATTCTTCAAGAAAATTTTGGACAAGAAAGTTCCACTATAGAGTCACTACAATTCAATCTGCCAATAATTGAAGCAGCAACAAGTAATTTCTCGCAGGAGAACAAAATCGGAAAAGGTGGATTTGGAGAAGTTTACAAGGGTATCCTTTATGATGGACGATCTATTGGTGTAAAGAGACTCTCGAAAAATTCTAAACAAGGCATAGAAGAGTTCAAAAATGAGGTTTTATTAATAGCCAAACTTCAACATAGGAATCTAGTGGCGTTCATAGGATTTTGTCTTGATAAACAAGAAAAAATACTTATCTATGAATATGTGCCAAACAAGAGTCTAGACTACTTCTTATTTGATACTAAACAAGAAAAAGTTTTGAGTTGGATTGAGCGTCACAAAATCATAGGCGGAATTGCTCGAGGAATTCTATATTTACATGAGCATTCTCGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAATATACTACTAGATGAAAATATGAATCCAAAAATTTCAGATTTTGGACTTGCTAGAATTATTGAAATAGATCAAGAGGAGGAAAGTACAAATAGAATCATCGGTACATATGGTTATATGTCTCCGGAGTATGCTATGTTTGGACAATTTTCTGAAAAATCTGATGTTTATAGTTTTGGTGTTATGATTCTCGAGATTATTAGTGGAAAAAAGAATATGAGCTCACATGAATCACATCATGTTGCTGATGGACTTCTAAATTTTGTTTGGAGAAATTGGAGGGATGAAACAACACTGAACGCATTGGATCCAAAATTAAGAGAAAACTATTCTAATATTGAGGTCATGAGATACATTCAAATTGGTCTATTATGTGTTCAAGAAAATCTAGATGTCAGACCCACAATGGTAACGATTGTTTCATATCTTAGCCGTCACACAATTGAGTTGCCATTTCCACAAGAACCTACTTTTTTCTTAAATCATAGAACAAATCCAATTGTTACACATGAATCAAGTTCAGGCCAAGATGCCAACACTTCCATACCATCTTCTACTAATGACATATCTATAAGTGAATTTTATCCTCGGTAG 2757 0.3983 MFSIIIHHTKTMRVLWKMKRSMAWNPFKLIFLCFTFFIFAIPQAKGADYLYRVCSEEDRSSDNSPYQTNLRTLLSSLSSNATANANGFYNNTILPTNSSDTVYGLFMCRGDLLPHACKDCVANATQTLSSDANCSLSKSGLIWYDDCMVRYSNLSFFSTINTTPTICVWNKANISSDLSSFNSLLASTMRETAHEAANSSKRYSAKQENLSENQTLYCLTQCTQDLSPQQCSQCLDDAISNIPTCCNGKQGGRVLFPSCNIRYELYPFYRVTDDAPQGPVPETTYAYTDSEYSEDPGYISHNCSNNNSDAAFRSNLRTLFSALSSNATSSYGFQTPEGTAYGLFRCRIDISHRLCELCIQNSTDKLTSECGLASTEAIIWYNHCWLRYSDRNFFSITETSPRFVNLNISNSNPIQSSVASELSNQLAKVATMTGNTDNKFQTDDSLRLNDKQTVFILGQCSSDLSSNSCIGCLNDVIGTAIPWSSLGSLGGRVMYPSCILRFELFQFYSLKPTPPTATPPPPGESQQRTIILIVTSSIIATGILFTFCYYFIRKKTRKNSRTILQENFGQESSTIESLQFNLPIIEAATSNFSQENKIGKGGFGEVYKGILYDGRSIGVKRLSKNSKQGIEEFKNEVLLIAKLQHRNLVAFIGFCLDKQEKILIYEYVPNKSLDYFLFDTKQEKVLSWIERHKIIGGIARGILYLHEHSRLKVIHRDLKPSNILLDENMNPKISDFGLARIIEIDQEEESTNRIIGTYGYMSPEYAMFGQFSEKSDVYSFGVMILEIISGKKNMSSHESHHVADGLLNFVWRNWRDETTLNALDPKLRENYSNIEVMRYIQIGLLCVQENLDVRPTMVTIVSYLSRHTIELPFPQEPTFFLNHRTNPIVTHESSSGQDANTSIPSSTNDISISEFYPR* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0788 918 Gene3D Transferase(Phosphotransferase) domain 1 668 871 - -
Pvu8g0788 918 ProSiteProfiles Gnk2-homologous domain profile. 162 268 IPR002902 -
Pvu8g0788 918 ProSiteProfiles Protein kinase domain profile. 592 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0788 918 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 38 279 - -
Pvu8g0788 918 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 520 909 - -
Pvu8g0788 918 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 289 512 - -
Pvu8g0788 918 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 38 279 - -
Pvu8g0788 918 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 289 512 - -
Pvu8g0788 918 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 520 909 - -
Pvu8g0788 918 SMART serkin_6 592 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0788 918 CDD STKc_IRAK 598 866 - -
Pvu8g0788 918 ProSiteProfiles Gnk2-homologous domain profile. 399 507 IPR002902 -
Pvu8g0788 918 Pfam Salt stress response/antifungal 421 503 IPR002902 -
Pvu8g0788 918 Pfam Salt stress response/antifungal 303 390 IPR002902 -
Pvu8g0788 918 Pfam Salt stress response/antifungal 173 266 IPR002902 -
Pvu8g0788 918 Pfam Salt stress response/antifungal 54 153 IPR002902 -
Pvu8g0788 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 713 725 IPR008271 GO:0004672|GO:0006468
Pvu8g0788 918 Gene3D Phosphorylase Kinase; domain 1 552 667 - -
Pvu8g0788 918 SUPERFAMILY Protein kinase-like (PK-like) 575 895 IPR011009 -
Pvu8g0788 918 Pfam Protein kinase domain 593 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0788 918 ProSiteProfiles Gnk2-homologous domain profile. 294 393 IPR002902 -
Pvu8g0788 918 MobiDBLite consensus disorder prediction 890 918 - -
Pvu8g0788 918 ProSiteProfiles Gnk2-homologous domain profile. 48 156 IPR002902 -
Pvu8g0788 918 Gene3D - 46 156 IPR038408 -
Pvu8g0788 918 Gene3D - 402 507 IPR038408 -
Pvu8g0788 918 Gene3D - 296 393 IPR038408 -
Pvu8g0788 918 Gene3D - 161 268 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0788 Pvu-Chr8 7426520 7430131 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0788 293 918 Receptor kinase-like Gene Family AT4G05200 41.921 1.73e-168 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g0788 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0788 - - pvu:PHAVU_008G077500g 1736.47