Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0787 ATGGGGAAAGGAACAGGGAGTTTCGGTAAGAGGAGGAACAAGACTCACACGCTCTGTGTGAGGTGTGGTCATCGGAGCTTCCACCTTCAGAAGAGTCGGTGTTCTGCGTGTGCTTTCCCCGCTGCGCGCACAAGAAAATATAACTGGAGCGCGAAGGCCATTAGGAGAAAGACTACCGGAACAGGAAGGATGAGGTACCTGCGTCACGTGCCTCGCAGATTCAAGAGTGGCTTCAGAGAGGGTACGGAGGCAGCACCAAGGAAGAGGGGAGCGGCTTCCACTGCCTAA 288 0.5521 MGKGTGSFGKRRNKTHTLCVRCGHRSFHLQKSRCSACAFPAARTRKYNWSAKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKRGAASTA* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0787 95 MobiDBLite consensus disorder prediction 71 95 - -
Pvu8g0787 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 95 - -
Pvu8g0787 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Pvu8g0787 95 PANTHER RIBOSOMAL PROTEIN L37 1 95 - -
Pvu8g0787 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Pvu8g0787 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
Pvu8g0787 95 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Pvu8g0787 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0787 Pvu-Chr8 7405719 7406006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0787 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 84.211 9.19e-56 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0787 K02922 - gmx:100306503 191.045