Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0785 ATGGGAAACTGCGGAACCAGAGAGGAATCTGCCGTAGTATCCAACGCGCAAGTTCAGCAGCTTCACCATGCGGCGTCCTTGGGCGCCAGTGCGAGGAGTCAGAATGCCGGTAGCGAGAAGAAGCACGGTCACGGTCACAGGCACAATCTGAGTGAGTGCGCTTCGGATCTGAGCGAAGCGTGTTCGACACCGCGCGGTAACAATAACAACAGCACGCACGTGATAGCGTTCACGCTCTACGAGTTGGAGACCATAACGAAGAGCTTCCGCGGAGACTACATCCTCGGCGAGGGAGGGTTCGGCACCGTTTACAAAGGCTACATTGATGAGAACGTCAGAGTGGGACTCAAATCGCTCCCTGTAGCGGTTAAGGTTCTGAACAAGGAAGGATTGCAGGGACATCGAGAGTGGCTTACGGAGGTGAATTTTCTAGGGCAGCTAAGGCATCCTAATCTGGTGAAGTTGATTGGGTACTGTTGTGAAGATGATCATAGGCTGCTTGTGTACGAGTTCATGTTCCGTGGGAGTTTGGAGAACCACTTATTCCGAAAGGCAACTGTCCCTTTATCATGGGCTACAAGAATGATGATTGCTATTGGAGCTGCCAAAGGACTTGCATTTCTCCACAATGCTGAAAGGCCGGTTATCTACCGTGACTTCAAAACGTCTAATATATTGTTGGACTCGGATTATACAGCAAAGCTTTCTGATTTTGGACTAGCTAAAGCAGGACCACAAGGTGACGAAACCCATGTATCCACTCGAGTCATGGGTACATATGGTTATGCTGCCCCTGAATATGTAATGACTGGCCACCTGACGGCTAGGAGTGACGTCTATAGCTTTGGTGTCGTTCTTTTGGAGCTCTTAACGGGAAGGAAATCAGTTGACAAGACCAGACCTGGGAAGGAACAGAGCTTGGTAGATTGGGCAAGGCCAAAGCTAAATGACAAGAGAAAGCTGCTACAAATAATTGATCCTAGATTGGAGAATCAATACTCAGTGAGAGCTGCACAAAAAGCATGTAGCTTGGCTTATTACTGTTTAAGCCAAAACCCCAAAGCGAGGCCCCTAATGAGCGATGTAGTTGAGACATTGGAACCCTTACAAAGTTCCAGTGTTGGTGCAGGTGAAGTCTCATTATCTGGATCAAATAGTGTGAGTGCTGGGCCTTTTGCGATGAACAAAATCTCTGACTACCGTATGCGCCAAAGGTTTTCAAACAATGTTGGTCCTGGTGCTACCTGTCGATCTCCAAACCCAAATTGTTCACCAGGTGCCCCAGCAGCACTACGGGTGAGATGA 1305 0.4866 MGNCGTREESAVVSNAQVQQLHHAASLGASARSQNAGSEKKHGHGHRHNLSECASDLSEACSTPRGNNNNSTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAIGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGAGEVSLSGSNSVSAGPFAMNKISDYRMRQRFSNNVGPGATCRSPNPNCSPGAPAALRVR* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0785 434 MobiDBLite consensus disorder prediction 23 49 - -
Pvu8g0785 434 CDD STKc_IRAK 95 369 - -
Pvu8g0785 434 MobiDBLite consensus disorder prediction 411 434 - -
Pvu8g0785 434 PANTHER OS01G0588500 PROTEIN-RELATED 39 421 - -
Pvu8g0785 434 Gene3D Transferase(Phosphotransferase) domain 1 172 379 - -
Pvu8g0785 434 Pfam Protein tyrosine and serine/threonine kinase 94 366 IPR001245 GO:0004672|GO:0006468
Pvu8g0785 434 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 39 421 - -
Pvu8g0785 434 ProSitePatterns Protein kinases ATP-binding region signature. 95 124 IPR017441 GO:0005524
Pvu8g0785 434 SUPERFAMILY Protein kinase-like (PK-like) 69 367 IPR011009 -
Pvu8g0785 434 ProSiteProfiles Protein kinase domain profile. 89 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0785 434 Gene3D Phosphorylase Kinase; domain 1 67 171 - -
Pvu8g0785 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0785 Pvu-Chr8 7391588 7395332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0785 70 379 Glycoside Hydrolase AT3G07070 52.396 5.71e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu8g0785 PK_Tyr_Ser-Thr 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0785 - - gmx:102662348 842.032