Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0783 ATGGCTGCTTGCGCTTTGTTCAGTGGTGGCACGAACATTACCGAAGATGGCAATGTTAACAACGGGAGTGGGAGTGCTACTAGTCCTCTGACAAGTGCATCTAACTCTAGCAACATGAGCAACGAGGAGCAGCAGAACCTACATGGCAACATGCCGCAGCCTCATTGTGATAGAAAGATGGTGAGGAAAAGAATGGCTTCTGAGATGGACCAAGTTAACGTTCATGTCACTCCACCACACAACGCTTCCTCCACAACTGATTATCCTAGGTTTCCTCGTAGAAGCACCGCCAACATGAACATGTCATCCTTAGAAAAAGGGTCCACCACCACAGCTACGTTAGCCGCAGGTACTTGTAGCAATAGCAATAATAATAATAATAATAATAATAATAATAATAACTATCATTTTAATAATAGTAACCATAATAGTAATAGTGGAAGTATTTCGTCAAGAGATAACGTTGCCATTCCAAATTACCCCACTGTGACGGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCCACCACCATCAATTCCTCTGGTGTTGCTCCAAACTACAGTGCTCACCAACACCATCATTTCCAAGGACTTGTTGAAAGTCAAAGCCAGGACCAGCAAAACCCCGTGCCTGCAGTGTGTGGATTCTCAGGGTTACCACTTTTTCCATCTCAAAGCCAAAGGAACCGAGACAACAACACCGCCACCACCAACGTAAGAAGCAGTGGTGGAAATATTGTCGACGTCGTTGCCTCTTCTTCTCCTTCCATGGATGACACTTCAGCCGCCACGAGTGGTTGGATCGATGGTATATTGAAGGATCTCATTCACAGTTCCAACAGTGTTTCGATTCCCCAGCTAATCAGCAACGTGAGGGAGATTATATACCCTTGCAACCCCAACCTTGCAACGATTCTTGAATACAGGTTGCGTCTTCTCACAGAGTCTACCCCACAAAACAAAAGAGGCACAGAAGGGGTGCCTCTTCCTCCTTCCGTGTCCTCAGTGAAGCTCATGAATAATCGTGTGGATGGCATTGTTCCTAATTTGCACTTCACAGATGCATCAGGTGCTGCTGTGGTTGTGAATCAGCACATGTTGTCCAATTGGGGTGTGCCTCCAATCACTCACCACCATGATAACAACGGCAACAACAACACCAACACCAACAGTAACCCTTCAGTTTCTTTGGTTACTTTGCCTTCACCGCCACCACCACCCCATTATTCACCGCCACAAGAGAAGCAGCCTCACCCTCAAGAGGAAGATCTAGCCGCAACCAACAGTGCTGCTGAGGTGGCACTCACAAGAAAGAAGAAAGAAGAGTTGCGGGAACAGAAGAAGAAGGACGAGGAGGGACTGCATCTCCTCACCTTGCTGCTTCAGTGCGCTGAAGCAGTTTCTGCTGAGAATCTAGAAGACGCCAACAAGATGTTGCTAGAGATTTCCCAATTATCAACACCGTTTGGCACATCAGCCCAGCGTGTGGCCGCTTATTTCTCGGAAGCCATTTCAGCAAGGTTGGTGAGTTCATGTCTGGGAATATATGCCACTTTGCCACACACCCATCAAAGTCACAAGGTGGCATCGGCTTTCCAAGTGTTCAATGGTATCAGTCCTTTCGTGAAGTTCTCACACTTCACAGCAAACCAAGCTATCCAAGAAGCTTTTGAAAGGGAAGAAAGGGTGCACATCATAGATCTGGATATAATGCAAGGGTTGCAGTGGCCGGGTTTGTTCTACATTCTAGCTTCAAGACCAGGTGGAGCCCCTTATGTGAGGCTCACGGGGCTTGGTACTTCCATGGAAGCACTCGAAGCAACGGGTAAACGTTTATCTGATTTTGCAAACAAACTTTGCCTCCCCTTTGAGTTCTTCCCAGTGGCCGAGAAAGTTGGGAACCTTGACCCTGAGAGGCTCAATGTTAGCAAAACCGAAGCTGTTGCAGTTCACTGGTTGCAACATTCCCTCTATGATGTCACCGGCTCAGACACCAACACCTTGTGGCTCTTGCAGAGGCTAGCACCTAAAGTGGTGACAGTGGTAGAGCAGGACCTAAGCAACACTGGTTCATTCTTGGGGAGGTTTGTCGAAGCCATACACTACTACTCGGCGTTGTTTGACTCTCTCGGGTCTAGCTATGGGGAGGAGAGTGAGGAGAGGCATGTGGTGGAGCAGCAGCTATTGTCTAGGGAGATTCGCAATGTGCTAGCTGTTGGGGGGCCATCGAGAACTGGGGAGCCAAAATTTCACAACTGGAGGGAGAAGTTTCAGCAGTGTGGATTTAGAGGTATATCTCTAGCTGGTAATGCTGCCACTCAAGCAAGTCTACTACTTGGTATGTTCCCATCGGAGGGTTATACCTTGGTGGAGGACAATGGCATCCTTAAACTTGGTTGGAAGGACCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCTCCCTTCCATGGTGGCACTGCCATTACCCATCACAATTAG 2484 0.4783 MAACALFSGGTNITEDGNVNNGSGSATSPLTSASNSSNMSNEEQQNLHGNMPQPHCDRKMVRKRMASEMDQVNVHVTPPHNASSTTDYPRFPRRSTANMNMSSLEKGSTTTATLAAGTCSNSNNNNNNNNNNNNYHFNNSNHNSNSGSISSRDNVAIPNYPTVTVTTNYSTMLLPSSTTINSSGVAPNYSAHQHHHFQGLVESQSQDQQNPVPAVCGFSGLPLFPSQSQRNRDNNTATTNVRSSGGNIVDVVASSSPSMDDTSAATSGWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNPNLATILEYRLRLLTESTPQNKRGTEGVPLPPSVSSVKLMNNRVDGIVPNLHFTDASGAAVVVNQHMLSNWGVPPITHHHDNNGNNNTNTNSNPSVSLVTLPSPPPPPHYSPPQEKQPHPQEEDLAATNSAAEVALTRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFYILASRPGGAPYVRLTGLGTSMEALEATGKRLSDFANKLCLPFEFFPVAEKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKFQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHGGTAITHHN* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0783 827 MobiDBLite consensus disorder prediction 400 416 - -
Pvu8g0783 827 MobiDBLite consensus disorder prediction 11 51 - -
Pvu8g0783 827 Pfam GRAS domain family 459 814 IPR005202 -
Pvu8g0783 827 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 186 816 IPR005202 -
Pvu8g0783 827 MobiDBLite consensus disorder prediction 374 428 - -
Pvu8g0783 827 ProSiteProfiles GRAS family profile. 449 814 IPR005202 -
Pvu8g0783 827 MobiDBLite consensus disorder prediction 120 150 - -
Pvu8g0783 827 MobiDBLite consensus disorder prediction 1 54 - -
Pvu8g0783 827 MobiDBLite consensus disorder prediction 380 399 - -
Pvu8g0783 827 PANTHER PROTEIN SCARECROW 186 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0783 Pvu-Chr8 7353287 7357430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0783 440 817 GRAS Transcription Factor Family AT5G41920 55.013 3.47e-140 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu8g0783 GRAS 2.6e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0783 - - gmx:100806779 1298.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0795 10 23741762 23743690 Pvu8g0783 8 7353287 7357430 PCT