Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0774 ATGGAAGGAAGAGAAGGGATCAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAGCCTATCATATGGCACCAAGGAGTGAAGCACCAAGTCAGGGTGGTCCTCCTGTGCCTGAAGCACCACCTGCAGCTATTGGTGTGTCACCAGTGAGTGTGGCATTGGATGTAACATCAATCAAGAAGAAAAGGGGCAGACCAAGAAAATATGGGCCAGATGGGTTGGTGAATATGGCATTGTCACCCATGCCAATCTCATCTTCTGCCCCATTTTCTAACAATAACTTTTCATCTGGGAAGAGAGGGAGACCGCGGGGGATGGATTACAAGCTGCCAAAGAAACTTGGAGTGGATTATCTTGGTGGCTCTGATGGTACAAGCTTTATGCCCCATATCATTACTGTCAATAGTGGCGAGGACATAGCAATGAAGATTATATCTTTTTCTCAACAAGGACCACGTGCTATATGCATCTTATCTGCTAGTGGTGTAATTTCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGAACTTTGACCTATGAGGGCCGTTTCGAGATACTTTCCTTGTCTGGATCATTCATGCCTACGGAAAACCAAGGAACAAGAAGCAGGTCTGGAGGGATGAGTGTTTCATTGTCAAGTCCAGATGGTCGCGTTGTAGGTGGTGGAGTTGCTGGTCTACTTGTAGCAGCAGGTCCTGTGCAGGTGGTGGTGGGAAGCTTTTTGCCGAGCAACCAGCAAGATCAGAAGCCAAAGAAGCCAAAGTCTGATTATGCATCAGCTACTGTTACCCCTCTCATTGCAGTGTCTTCTGCACCACCCTCTACCAATGGTGAAAAGGAGCTTGTCATGGGTGGACACATAATGCACAACTTAGGAACAAACCTTGCTTCTCCCTCGGCCTTTCGCCGGGAAAACTGGGTTAACATGCACTCGATGACAGACTCGATGAAGTCAGCCACTGATATTAACATATCCTTGCCTGATAGTTAA 999 0.4735 MEGREGISSGVTVIGAEAPSAYHMAPRSEAPSQGGPPVPEAPPAAIGVSPVSVALDVTSIKKKRGRPRKYGPDGLVNMALSPMPISSSAPFSNNNFSSGKRGRPRGMDYKLPKKLGVDYLGGSDGTSFMPHIITVNSGEDIAMKIISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAAGPVQVVVGSFLPSNQQDQKPKKPKSDYASATVTPLIAVSSAPPSTNGEKELVMGGHIMHNLGTNLASPSAFRRENWVNMHSMTDSMKSATDINISLPDS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0774 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 331 IPR039605 GO:0003680
Pvu8g0774 332 MobiDBLite consensus disorder prediction 18 45 - -
Pvu8g0774 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 130 243 IPR005175 -
Pvu8g0774 332 CDD DUF296 130 220 IPR005175 -
Pvu8g0774 332 Gene3D - 130 263 - -
Pvu8g0774 332 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 331 - -
Pvu8g0774 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 247 - -
Pvu8g0774 332 ProSiteProfiles PPC domain profile profile. 125 266 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0774 Pvu-Chr8 7270086 7274801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0774 6 274 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.116 6.29e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0774 - - gmx:100777213 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0774 8 7270086 7274801 Pvu8g0774 8 7270086 7274801 ECH
Pvu8g0774 8 7270086 7274801 Pvu10g0881 10 31525272 31531810 PCT