Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0772 ATGAGTGGTAGTGGTGCTGGTAGCAGCACCACTGGTAGCCCTTGTGGAGCTTGCAAGTTTCTCAGAAGAAAATGTATTCCTGGTTGTATCTTTGCTCCGTATTTCGATGCGGAGCAAGGAACAAACCATTTTGCTGCTGTGCACAAGGTTTTTGGGGCTAGCAATGTGTCCAAGCTTCTCCTTAGCATTCCTGTGCACAAAAGGCTTGATGCAGTCATCACCATTTGTTATGAAGCACAATCACGCCTCAGAGATCCTGTTTATGGCTGTGTTTCGCACATCTTTGCCCTTCAGCAACAGGTGGTGAACTTACAAGCAGAACTCTCATACCTACAAGGCCACTTTGCCCAAATGGAGGTACCTCATCCGCCGCCACCTCCTCTAACGCAATCGGTGGCGACACCGCGATTCTCAGTGAGCGATCTACCATCGACCACCGCAGCGGCAGCGGCAACCGCCACTTATGACCTGTCTTCACTTTTTGATCCAACAGGGCAAGTTTCATGGGCCATGCAACATAGGGCAATGGACCCACGTCAATACATGGGTCATCCTCCATCAGCTTCTACTAGGGTTAACGTTCAAGCTGTGGCAGGTGACCTTTCTCACAGACATGGTTCTCCTCCATCACCTCCTGCTTCAAGCAATGCTTCACCATCTCTGTCCCTTTCCAAATGA 678 0.5 MSGSGAGSSTTGSPCGACKFLRRKCIPGCIFAPYFDAEQGTNHFAAVHKVFGASNVSKLLLSIPVHKRLDAVITICYEAQSRLRDPVYGCVSHIFALQQQVVNLQAELSYLQGHFAQMEVPHPPPPPLTQSVATPRFSVSDLPSTTAAAAATATYDLSSLFDPTGQVSWAMQHRAMDPRQYMGHPPSASTRVNVQAVAGDLSHRHGSPPSPPASSNASPSLSLSK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0772 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 3 201 - -
Pvu8g0772 225 Pfam Lateral organ boundaries (LOB) domain 14 112 IPR004883 -
Pvu8g0772 225 PANTHER LOB DOMAIN CONTAINING PROTEIN 3 201 - -
Pvu8g0772 225 ProSiteProfiles LOB domain profile. 13 115 IPR004883 -
Pvu8g0772 225 MobiDBLite consensus disorder prediction 200 225 - -
Pvu8g0772 225 MobiDBLite consensus disorder prediction 208 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0772 Pvu-Chr8 7225971 7229473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0772 17 225 AS2 family AT2G45420 56.388 5.42e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu8g0772 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0772 K21994 - gmx:100790517 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0772 8 7225971 7229473 Pvu8g0772 8 7225971 7229473 ECH
Pvu8g0772 8 7225971 7229473 Pvu10g0884 10 31635596 31639916 PCT