Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0763 ATGGCTACTCATCTTGCTGCAGCAAAGTCCACCATGACGACGTCGTCTCAGGATAAACGACACCGTTCCATCTTCGATGTTCCGTCGAATTTCTTCGACTCTTCCCGCCTTCTCCCTTCCCCTCACTCTTCCGTTTCCGATCACCACACCGCAGGCCAAACCCAAACCCTTGAATCCTCCTCAAACAACGTCGTTTTTCTTGATGACTCTCGAAACGCTGTCGTTTCCGCGCCTAGGTTGACCTGCAACACCTGCAGAACGCAATTCGATTCCCTCAAAGACCAGCGTGCCCATTTCAAATCCGACATTCATCGGTTCAACGTGAAGCTGACGATTGCGGGGAAGAATATTGTGAAGGAAGAAGATTTTGAGGTGCTGACATCTGAATTTGTCAAAGACTATGATGTGTCCAGTATCTCGGGATCAGAAAGCGATGATGATAGTGAAACTGAGTCACAAAGTCAAATTGTACTGAATGTCAAATCGAGTGAAAATTTTAAACAGAAACTCTTTTTTCTTCTTCCGACAGGGCAGAGAGTTTCTGTCTGGAAGTGCTTGATTATGAATGTGACTGAAAATGTACTGTATGCTGATGAAAAGGCAGAGAATGAAGTTGTTCAGAAGTTGAAATCTCTGACTGCTGAGCCCAGAAACAATACTCAGTTGAGGATTGTTCTGCTTGCATCTGGTGGGCACTTTGCAGGTTGTGTCTTTGATGGTGATGCTGTTGTGGCTCACAAGACATTTCACAGATATGTTGTAAGGGCCAAGGCAGGAAAAAAACAATCATCAAAAGATGCTTCTGGCGGGGGTATTCATTCTGCTGGGGCCTCACTTCGTCGTTATAATGAACTCGCATTAAAGAAGGAAGTGCATGAGCTCTTTACTGCTTGGAAACCTTATTTTGATGCCTCCAATTGCGTGTATATACATGCACCTTCAAGTAGTCGTCAACTGCTTTATGATGGAGAAAGATCGTATTTTGGCAATCAGCAGTGTGCTATTAGAAACATTGCTTTGACTGTTCGGAGGCCTACTTTAAGGGAAGCAAAGCGTGTATATAGTCAGTTGACCCAGGTAACCTACGAAGCTGATGAGAAGGAAGTTTTACAAAGCAAACAAGAGGATTTGGTATCAGTTCACATTTCTAAAATAAATAGCAGTCCAACCTCTGACCAATGTAATGGGGCTGTGTTGGATGACAAAGATAAAGCTGAAGCTTGTTCAAGTAAACAAAATGATGCACTCTCCGTTTCGAGTAATGGAGAAAGTGAGAATGAGCAATCTGGTAAATCAACTCCTTTACATGAAGCAGCCAAATCTGGTGACTCTGTAAAGGTTTTGGAGCTCCTGGAACAGGGCTTGGATCCTTGTGCCAAAGATGAAAGGGGGCGGACCCCATATATGTTGGCACATGACAAAGAAACGAGGAATGATTTCAGAAGATTTATGGCATCAAATCTTGACAAATGGGATTGGCATGCTGCAAAAGTGCCCAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTAAGCAGGCCGAAAAAGATGCTAAGAGAAAAGCAAGAGCAAAGGAATTAAAGAAATTGCGTAAAGCAAAAGAAAAGAAGGCTCAGGTTGAAGCCACCTTGCCAAAGAATGATTCCAAAACTGTAGAGAAGCTAGTAACTACTTCAACATCGATAAAGGGACAATCTCAACTAAAAAGTGGCGTGCAATTATCCAAAGAGGACCAAATAAGAATGGCACAGGCTGCCGAAAGAGAAAAGCGAGCAGCTGCTGCTGAGAGGAGAATAGCTGCTCTCAAAATTCAAGCTAACAGTACGACCGGTGCACCTAGCATGTCAGAGCCAAAAAGTGGATTAGCCGGTGACATTTACTGTTCCTGTTGTAATTCATCACTTGCTGGTAAAGTTCCCTTCCACCGGTATAATTACAAATACTGCAGCACATCATGCATGCATGTACACAAGGACATCCTAGAAGATCATGACAACGTGTTAGATATTTAA 2016 0.433 MATHLAAAKSTMTTSSQDKRHRSIFDVPSNFFDSSRLLPSPHSSVSDHHTAGQTQTLESSSNNVVFLDDSRNAVVSAPRLTCNTCRTQFDSLKDQRAHFKSDIHRFNVKLTIAGKNIVKEEDFEVLTSEFVKDYDVSSISGSESDDDSETESQSQIVLNVKSSENFKQKLFFLLPTGQRVSVWKCLIMNVTENVLYADEKAENEVVQKLKSLTAEPRNNTQLRIVLLASGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGGGIHSAGASLRRYNELALKKEVHELFTAWKPYFDASNCVYIHAPSSSRQLLYDGERSYFGNQQCAIRNIALTVRRPTLREAKRVYSQLTQVTYEADEKEVLQSKQEDLVSVHISKINSSPTSDQCNGAVLDDKDKAEACSSKQNDALSVSSNGESENEQSGKSTPLHEAAKSGDSVKVLELLEQGLDPCAKDERGRTPYMLAHDKETRNDFRRFMASNLDKWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQVEATLPKNDSKTVEKLVTTSTSIKGQSQLKSGVQLSKEDQIRMAQAAEREKRAAAAERRIAALKIQANSTTGAPSMSEPKSGLAGDIYCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKDILEDHDNVLDI* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0763 671 ProSiteProfiles Ankyrin repeat profile. 430 462 IPR002110 GO:0005515
Pvu8g0763 671 MobiDBLite consensus disorder prediction 1 20 - -
Pvu8g0763 671 Pfam Vms1-associating treble clef domain 628 660 IPR041540 -
Pvu8g0763 671 Coils Coil 506 544 - -
Pvu8g0763 671 Coils Coil 662 671 - -
Pvu8g0763 671 Gene3D - 395 498 IPR036770 -
Pvu8g0763 671 MobiDBLite consensus disorder prediction 509 523 - -
Pvu8g0763 671 MobiDBLite consensus disorder prediction 38 59 - -
Pvu8g0763 671 SUPERFAMILY Ankyrin repeat 431 478 IPR036770 -
Pvu8g0763 671 ProSitePatterns Zinc finger C2H2 type domain signature. 82 104 IPR013087 -
Pvu8g0763 671 MobiDBLite consensus disorder prediction 409 441 - -
Pvu8g0763 671 MobiDBLite consensus disorder prediction 504 523 - -
Pvu8g0763 671 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 15 661 - -
Pvu8g0763 671 MobiDBLite consensus disorder prediction 410 435 - -
Pvu8g0763 671 Coils Coil 577 606 - -
Pvu8g0763 671 MobiDBLite consensus disorder prediction 531 552 - -
Pvu8g0763 671 Pfam Bacteroidetes VLRF1 release factor 224 362 IPR041175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0763 19 611 C2H2 Transcription Factor Family AT1G01930 51.876 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0763 K26089 - gmx:100527709 1026.16