Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0761 ATGAGTTTCTTTCAGGGAATTATTGATTCCTTTAACTCCATCTTCGTTCCTCATAACAATCACAACACCGCAAATTCACCATCTCTTTCTTCTTCTTCACCGGATCCAATGGAAGCTCCTCCTCCTTCTGTTTCCAACGACCGTGTCGCTTACAAGCTCAAAGGCTACTTCGATTTGGCCACGCAGGAGATCGCCAAGGCCGTTAGGGCTGAGGAATGGGGTTTGGTCGACGACGCGCTTCTCCACTACAGAAACGCGCAATCGATCCTCCTCGAAGCTAATTCAACTCCCGTTCCTTCCTACATCACTCCCAGCGAACAGCAGAAGGTGCAGTCGCATCGTGAGAAGATATCCAAATGGCAGAGTCAAGTTTCTGAGAGATTGCAGACTCTCGCTAGACGAGCTGGTAGCTCATCTGCCAATCAGAGCACTACTGCAGTACCGCTTAAGCCATTGGGTACTAGAAAGAATGTGTTACAAAAGCCCCCTCAAAGAACAGGTCAGGTGACTAAAGTTGGAAGCCCAAAATCGAGTCAAGCATCTGGTGTAAATTATGATACCAAACTAGTTGAAATGATTAACACTGCCATAGTAGACAGAAGTCCTTCTGTTAAATGGGAAGATGTTGCTGGGCTTGAAAAGGCAAAGCAAGCTTTAATGGAAATGGTTATTTTACCAACTAAGAGAAGAGACTTGTTTACGGGTCTTCGAAGGCCAGCCAGAGGTTTGCTTCTCTTTGGTCCACCTGGTAATGGAAAAACCATGCTTGCCAAAGCAGTGGCGTCAGAATCGCAAGCAACATTTTTTAATATCACGGCAGCCTCCTTGACATCAAAATGGGTGGGTGAAGGTGAAAAGCTTGTCCGGACACTATTCATGGTAGCTATATCAAGACAACCATCTGTAATTTTCATTGATGAGATTGATAGTATAATGTCAACAAGGTTGGCAAATGAGAATGATGCCAGCAGACGATTAAAATCTGAATTTCTTATCCAGTTTGATGGGGTGACCTCCAATCCTGATGATATTGTGATTGTAATTGGTGCGACAAATAAGCCGCATGAATTGGATGATGCAGTTCTTAGGAGACTGGTAAAGAGAATATACGTACCTTTACCAGATGAAAATGTTCGAAAGCTTCTGCTAAAACACAGGCTCAAGGGTCAAGCATTCTCCTTACCTAGTAGAGATCTGGAGAGGGTTGTAAAAGAGACAGAAAGATATTCTGGTAGTGATCTGCAAGCCTTGTGTGAAGAAGCTGCAATGATGCCAATTAGAGAGTTGGGTGCTGACATTCTTACTGTTAAGGCTAATCAGGTAAGAGGATTGAGATACGAAGACTTTAAGAAGGCAATGGCTACAATTAGACCAAGTTTAAACAAAAGTAAGTGGGAAGAGCTTGAGCGCTGGAATGAGGAATTTGGCTCTAATTGA 1437 0.4363 MSFFQGIIDSFNSIFVPHNNHNTANSPSLSSSSPDPMEAPPPSVSNDRVAYKLKGYFDLATQEIAKAVRAEEWGLVDDALLHYRNAQSILLEANSTPVPSYITPSEQQKVQSHREKISKWQSQVSERLQTLARRAGSSSANQSTTAVPLKPLGTRKNVLQKPPQRTGQVTKVGSPKSSQASGVNYDTKLVEMINTAIVDRSPSVKWEDVAGLEKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNITAASLTSKWVGEGEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSNPDDIVIVIGATNKPHELDDAVLRRLVKRIYVPLPDENVRKLLLKHRLKGQAFSLPSRDLERVVKETERYSGSDLQALCEEAAMMPIRELGADILTVKANQVRGLRYEDFKKAMATIRPSLNKSKWEELERWNEEFGSN* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0761 478 Gene3D - 374 456 - -
Pvu8g0761 478 CDD MIT_spastin 53 131 - -
Pvu8g0761 478 Gene3D - 202 472 IPR027417 -
Pvu8g0761 478 MobiDBLite consensus disorder prediction 24 45 - -
Pvu8g0761 478 Gene3D - 46 135 - -
Pvu8g0761 478 SMART AAA_5 239 375 IPR003593 -
Pvu8g0761 478 CDD AAA 228 373 - -
Pvu8g0761 478 Pfam Vps4 C terminal oligomerisation domain 444 476 IPR015415 -
Pvu8g0761 478 MobiDBLite consensus disorder prediction 133 150 - -
Pvu8g0761 478 Pfam AAA+ lid domain 398 429 IPR041569 -
Pvu8g0761 478 SMART smart 53 130 IPR007330 -
Pvu8g0761 478 MobiDBLite consensus disorder prediction 159 180 - -
Pvu8g0761 478 MobiDBLite consensus disorder prediction 133 180 - -
Pvu8g0761 478 Pfam ATPase family associated with various cellular activities (AAA) 243 373 IPR003959 GO:0005524|GO:0016887
Pvu8g0761 478 PANTHER BNAC04G50250D PROTEIN 4 478 - -
Pvu8g0761 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 475 IPR027417 -
Pvu8g0761 478 PANTHER AAA DOMAIN-CONTAINING 4 478 - -
Pvu8g0761 478 ProSitePatterns AAA-protein family signature. 345 364 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0761 Pvu-Chr8 7069098 7074805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0761 184 428 Calmodulin-binding Proteins AT3G56690 40.157 3.19e-46 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0761 K13254 - gmx:100780946 848.195