LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g0748	ATGCAGGAGACAATTGAACGCTACCGCAGGCATAACAGGAGTTCTCAAACAGTGAACAGATCTGATGAACAGAATATGCAGCATTTGAAGCAAGAAACAGCAAACTTGATGAAGAAGATTGACCTACTTGAAGCTTCAAAACGGAAGCTCTTGGGAGAAGGCTTGGGTTCATGCTCCTTAGAAGAACTGCAACAGATAGAACAACAGTTGGAAAGGAGTGTAAGCAATGTTCGTGCAAGAAAGAATCAGGTTTACAAGGATCAAATCGAGCAATTAAAAGAAAAGGAAAGAAGCCTATATGCTGAAAATGTCAGGCTGTGTGAGCAGTATGGTATCCAGCAACAGCCAGGAACAAAGGATGTGAGAGAAAATCAACCCTATGAAGAAAGCAGTCCAAGTTCAGAAGTGGAGACTGAATTGTTCATTGGACTACCTAGGTCTAGTTGA	447	0.4183	MQETIERYRRHNRSSQTVNRSDEQNMQHLKQETANLMKKIDLLEASKRKLLGEGLGSCSLEELQQIEQQLERSVSNVRARKNQVYKDQIEQLKEKERSLYAENVRLCEQYGIQQQPGTKDVRENQPYEESSPSSEVETELFIGLPRSS*	149

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g0748	148	MobiDBLite	consensus disorder prediction	113	148	-	-
	Pvu8g0748	148	Coils	Coil	60	109	-	-
	Pvu8g0748	148	MobiDBLite	consensus disorder prediction	1	25	-	-
	Pvu8g0748	148	PANTHER	MADS BOX PROTEIN	1	147	-	-
	Pvu8g0748	148	MobiDBLite	consensus disorder prediction	113	137	-	-
	Pvu8g0748	148	MobiDBLite	consensus disorder prediction	1	17	-	-
	Pvu8g0748	148	Pfam	K-box region	22	109	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
	Pvu8g0748	148	ProSiteProfiles	K-box domain profile.	26	116	IPR002487	GO:0003700\|GO:0005634\|GO:0006355
	Pvu8g0748	148	PANTHER	MADS-BOX TRANSCRIPTION FACTOR 56	1	147	-	-
	Pvu8g0748	148	Coils	Coil	19	46	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu8g0748	Pvu-Chr8	6933835	6937059	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu8g0748	1	95	MADS-box Gene Family	AT2G45660	67.368	1.22e-40	132

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g0748	-		-	pvu:PHAVU_008G073800g	278.1

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu8g0748	8	6933835	6937059	Pvu10g0917	10	32835224	32839144	PCT