Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0744 ATGCCTCGTGGGACGCTTGAAGTTATTTTAACAAGTGCAAACCACCTTCACAACAGTGATTTTTTCGGAAAAATGGATCCTTATGTGATTCTCACTTATCGCACTCAGGAGCACCGAAGCAGTGTGGCTAAAGGTGCAGGATCAAAACCCCGTTGGAATGAAAGCTTTCTTTTCACTGTTTCTGACAGTGTCTCTGAACTTAGTCTCAGGCTAATGGACAAAGATACCTTAACCAAGGATGATTTTCTGGGCGAGACCAGAATTAATCTGGAACCTGTGTTTGATGTGGGGAGCATTCCAGAAAGTTCTTACAATGTTGTGAAGGACCAAAACTACTGTGGGGAGGTTAAGGTGGCACTCACCTTTAATCCTGAGAGAGGATATGGAGAAGAATAA 396 0.4318 MPRGTLEVILTSANHLHNSDFFGKMDPYVILTYRTQEHRSSVAKGAGSKPRWNESFLFTVSDSVSELSLRLMDKDTLTKDDFLGETRINLEPVFDVGSIPESSYNVVKDQNYCGEVKVALTFNPERGYGEE* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0744 131 Pfam C2 domain 4 96 IPR000008 -
Pvu8g0744 131 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pvu8g0744 131 PANTHER C2 DOMAIN-CONTAINING 1 127 - -
Pvu8g0744 131 SMART C2_3c 5 102 IPR000008 -
Pvu8g0744 131 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
Pvu8g0744 131 Gene3D C2 domain 2 125 IPR035892 -
Pvu8g0744 131 PANTHER ELICITOR-RESPONSIVE-LIKE PROTEIN 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0744 Pvu-Chr8 6865327 6869197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0744 4 94 C2H2 Transcription Factor Family AT4G21160 31.868 5.45e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0744 - - gmx:100814819 226.098