Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0740 ATGCAAAACTCTAGCGAATCTTCTCCAGCTTCCCCTGTGCCGGTGGACTCCGTGCCGTTCCTCCCACAGAGCCGCCGTGTCTCCCGCCGTGCGCCGCTGCGGACGGCGTCCAGCTTCTTCCGGCGCGCGAGCGGGCGGCGCCTTATGCTGGGAGAGGCTTCGGTGCGCGTGCGGGAGGCGGCTGCGGCGGAGGTGGAGGAGCGGCAGAGCGAATGGGCGTACTCGCGGCCGGTGGTGGCGGTAGACGTGCTGTGGAACGCGGCGTTTCTGGTGATCGGCGCGTCGGTGCTGTGGCTGGGCTCTGCGGAGGAGCCGAGCGTGCCGCTGAGGACGTGGATTGTGGGGTATTTGGTGCAGGGCATGCTCCACTCTCTCTGCGTCCTCATTGAGTTCCGAAGGAGAATGATGAGTGGGACCCATTTCCGTTCCAATGTACCAAACCATGTTCAATGGAGCTTCACTTCTGAAAGTGACCAAGAGTTTTATGCTTTCGAACCCACTCACCACGGTGATGAACACAGCATCATAAAACACATAGAGTCGGCAAATACCATGCTTTCATTTATATGGTGGACTGTTGGGGTCTACTGGGTAACTCTTGGTGGCCAGAGTTTGACAACGGATGCACCTCAGCTTTACTGGGTCTGTATTGCATTTCTTTCTTTCGACGTTTTGATTGTACTGATCTGTGTTGCTGTTGCATGCCTTATTGGTATTGCTGTTTGCTGTTGTCTTCCATGCATCCTTGCTCTCCTGTATGCAGTGACAGATCAGGAAGGGGCAACGAAGGAAGAGATTGACCAGTTGCCAAAATATAAGTTCAGAATAATAAAAGAAGGTGATATTGAAGAACCTTCGAGAGGAATAATGACCGAATCTGAGAGTGAGACAGCCACTGACCATGTTGTTGCCTTAGAAGATGCAGAATGCTGTATCTGCCTCTCTCCATATGATGATGGTGCTGAACTCAGAGAACTTCCTTGCAACCACCATTTTCATAGAACATGCATAGACAAATGGCTGCTAATCAATGCTACCTGCCCTCTCTGCAAGCTTGACATTTTGATTGGAAGCCACCATCAAGAAGTTTGA 1092 0.5229 MQNSSESSPASPVPVDSVPFLPQSRRVSRRAPLRTASSFFRRASGRRLMLGEASVRVREAAAAEVEERQSEWAYSRPVVAVDVLWNAAFLVIGASVLWLGSAEEPSVPLRTWIVGYLVQGMLHSLCVLIEFRRRMMSGTHFRSNVPNHVQWSFTSESDQEFYAFEPTHHGDEHSIIKHIESANTMLSFIWWTVGVYWVTLGGQSLTTDAPQLYWVCIAFLSFDVLIVLICVAVACLIGIAVCCCLPCILALLYAVTDQEGATKEEIDQLPKYKFRIIKEGDIEEPSRGIMTESESETATDHVVALEDAECCICLSPYDDGAELRELPCNHHFHRTCIDKWLLINATCPLCKLDILIGSHHQEV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0740 363 Pfam Ring finger domain 309 351 IPR001841 -
Pvu8g0740 363 CDD RING-H2_RNF111_like 309 353 - -
Pvu8g0740 363 PANTHER TARGET OF ERK KINASE MPK-1 4 362 - -
Pvu8g0740 363 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 362 - -
Pvu8g0740 363 SMART ring_2 310 350 IPR001841 -
Pvu8g0740 363 ProSiteProfiles Zinc finger RING-type profile. 310 351 IPR001841 -
Pvu8g0740 363 SUPERFAMILY RING/U-box 296 356 - -
Pvu8g0740 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 355 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0740 Pvu-Chr8 6800934 6805257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0740 7 361 C3H Transcription Factor Family AT1G68070 47.222 1.02e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0740 - - gmx:100795425 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0740 8 6800934 6805257 Pvu8g0740 8 6800934 6805257 ECH