Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0738 ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGGACTTCCGTTTCATCAGATCCTGGAAGTGATTTCACCACAAAAAGACCTAAGTTTGATCAAGGAACAGAAGAAAAGGTCAATGAGGAAACATATTCTAATGAGAAATGCGGAAAGGATCAGGAGCAGTATGGAGATGCATCGACAGAAAGTGATCATTCCAATGTTGCTACAGCTAGATCTGAGAAGTCAGGTTATGATCAACTTCCAAAGGAATTAAATGAAATGAAAATTGGAGACGACAAAGGAAAAAACAACAATGAGAAGGATATGGAAGCAACCATTGTAAATGGCAATGGAACAGAAACAGGCCAAATAATTACAACTGCTATTGGTGGTCGAGATGGACAACCAAAGCGGACAATCTCATACATGGCAGAACGGGTAGTTGGCACTGGTTCTTTTGGTGTTGTTTATCAGGCCAAGTGCATTGAAACTGGTGAAGCAGTTGCCATAAAAAAAGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTACAGGTTATGCGTATACTTGACCATGCCAATGTTCTCAGACTTAAGCACTGTTTCTATTCAGCTGCCGAGAAAGATGAGTTGTACCTTAACCTAGTTTTGGAGTATGTGCCTGAAACGGTCTACAGAGTTTCCAAGCACTATATCAGAATGCACCAACATATGCCTATCATTTATGTGCAACTGTATTTGTACCAGATATGTCGGGGTTTAAATTATTTGCATCACGTGATTGGAGTCTGTCATCGGGACATCAAACCCCAGAATCTATTGGTTAATACCCAGAATCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCCGGTGAACCCAACATATCATACATATGCTCGCGGTATTACAGAGCTCCAGAGCTTATATTTGGTGCAACAGAGTACACAACTGCTATTGATATTTGGTCCGCTGGTTGTGTTATGGCTGAGCTTCTTCTAGGACATCCAATGTTTCCTGGAGAGAGTGGGGTTGATCAGTTGGTTGAGATCATTAAGATTCTGGGAACACCGACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACCGAATTTAAGTTTCCTCAGATAAAAGCACACCCTTGGCATAAGGTTTTCCACAAGAAGATGCCAACAGAAGCAGTGGATCTAGTGTCGAGGATGCTTCAGTATTCACCAAATCTACGTTGCACTGCTTTGGAGGCTTGTGGACACCCTTTCTTTGATGATCTGAGAGACGCAAATGCATGCTTGCCAAATGGGCGACCATTGCCTCCGTTGTTTGATTTCTCTGCACAAGAACTATCAGGCACACCGGATGAGTTGCATCGACGTCTCATTCCTGATCATGCTAGAAGTTGA 1401 0.419 MNMMRRLKSIASGRTSVSSDPGSDFTTKRPKFDQGTEEKVNEETYSNEKCGKDQEQYGDASTESDHSNVATARSEKSGYDQLPKELNEMKIGDDKGKNNNEKDMEATIVNGNGTETGQIITTAIGGRDGQPKRTISYMAERVVGTGSFGVVYQAKCIETGEAVAIKKVLQDKRYKNRELQVMRILDHANVLRLKHCFYSAAEKDELYLNLVLEYVPETVYRVSKHYIRMHQHMPIIYVQLYLYQICRGLNYLHHVIGVCHRDIKPQNLLVNTQNHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVMAELLLGHPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPTEAVDLVSRMLQYSPNLRCTALEACGHPFFDDLRDANACLPNGRPLPPLFDFSAQELSGTPDELHRRLIPDHARS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0738 466 Pfam Protein kinase domain 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0738 466 MobiDBLite consensus disorder prediction 61 75 - -
Pvu8g0738 466 Gene3D Phosphorylase Kinase; domain 1 122 216 - -
Pvu8g0738 466 ProSitePatterns Protein kinases ATP-binding region signature. 143 167 IPR017441 GO:0005524
Pvu8g0738 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Pvu8g0738 466 MobiDBLite consensus disorder prediction 1 100 - -
Pvu8g0738 466 MobiDBLite consensus disorder prediction 26 60 - -
Pvu8g0738 466 CDD STKc_GSK3 132 424 IPR039192 -
Pvu8g0738 466 PANTHER SHAGGY-LIKE KINASE 6 466 - -
Pvu8g0738 466 SUPERFAMILY Protein kinase-like (PK-like) 136 447 IPR011009 -
Pvu8g0738 466 ProSiteProfiles Protein kinase domain profile. 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0738 466 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 466 - -
Pvu8g0738 466 Gene3D Transferase(Phosphotransferase) domain 1 217 465 - -
Pvu8g0738 466 SMART serkin_6 137 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0738 466 MobiDBLite consensus disorder prediction 78 100 - -
Pvu8g0738 466 MobiDBLite consensus disorder prediction 9 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0738 Pvu-Chr8 6783650 6788589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0738 141 430 MAP Kinase Gene Family AT3G59790 34.884 2.48e-54 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pvu8g0738 Pkinase 4.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0738 K00924 - gmx:100786458 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0738 8 6783650 6788589 Pvu10g0940 10 33466402 33471125 PCT