Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0737 ATGAGTTTTGGGGGGTTTCTTGAGGCCAAACAAAGTGGTGGAGGCGGTAGGATCGTATCAGATATTCCTTACAGCAACGGTTCCAACCACAGCAACGATATAATGCCCTCTGGTGCAATCTCGCAGCCTCGTTTAGCCACTCCTACTTTGGCCAAATCCATGTTCAACTCTCCTGGCCTTTCTCTTGCACTTCAAAGTGATGTCGATGGACAAGGGGATATGAACAGATTAATGCCCGAGAATTTTGAGCAAAATGGGTTGAGAAGGAGCCGGGAAGAGGAGCATGAAAGCAGATCTGGCAGTGATAACATGGACGGTGCTTCTGGTGATGATTTTGATGCCGCCGACAACCCACCAAGAAAAAAACGTTATCACCGACACACTCCTCAGCAAATTCAAGAACTTGAAGCGCTTTTCAAGGAGTGTCCTCATCCGGATGAGAAGCAAAGGCTTGAACTCAGCAGAAGGCTGAATTTGGAAACGAGGCAAGTAAAGTTTTGGTTCCAAAATCGAAGAACACAGATGAAGACACAATTGGAACGGCACGAGAACTCGCTGCTAAGGCAAGAGAATGACAAACTTAGAGCGGAGAACATGTCTATGAGGGAAGCTATGAGAAATCCTATGTGCTCAAACTGTGGAGGTCCTGCAATGATTGGTGAGATTTCACTTGAAGAACAGCATCTCAGGATTGAGAATGCTAGATTGAAGGATGAACTAGACCGTGTTTGTGCACTTGCTGGCAAGTTTTTGGGTCGCCCCATTTCTTCTTTAACAAACTCAATTGGGCCTCCATTGCCAAACTCAAGCTTGGAGCTTGGGGTTGGGAGCAATGGTTTTGGAGGTTTGAGCACCGTGCCTTCAACATTGCCTGATTTTGGGGTGGGGATATCAAGCCCCTTAGCTATGATGTCACCTTCAACTAGACCAACAGCAACATCAACAGTGGTGACTCCTGGCCTTGACAGATCAGTGGAGAGGTCTATTGTTTTGGAACTTGCTTTGGCTGCAATGGATGAGTTGGTGAAGATGGCTCAGACCGGGGAGCCTCTTTGGATCAGGAGTTTGGAAGGGGGAAGAGAAATTCTCAACTATGAGGAGTACACAAGGACAATGACACCTTGCATTGGTTTGAGACCCAATGGTTTTGTCACCGAGGCCTCTAGACAAAATGGCATGGTCATCATAAACAGCTTGGCTCTTGTTGAAACATTAATGGACTCGAATCGATGGTCAGAGATGTTCCCTTGTATGATTGCTAGAACCTCCACCGCTGAAGTTATATCTAATGGAATAAATGGAACTAGAAATGGTGCTCTTCAGCTTATGCATGCCGAACTTCAAGTCCTTTCGCCTTTGGTTCCTGTTCGTGAGGTCAATTTTCTACGCTTTTGCAAGCAGCACGCAGAGGGCTTGTGGGCAGTGGTGGATGTGTCCATAGACACCATCCGAGAAACTTCTGGTCCACCCACTTTTGTGAACTGTAGGAGGCTTCCTTCTGGTTGCGTGGTGCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAACATGCAGAGTACGACGAAAGCCAAGTTCACCAGCTGTACAGACCCTTGTTGAGCTCAGGCACAGGGTTTGGAGCACAACGTTGGGTTGCCACCCTTCAACGCCAATGCGAGTGCTTAGCCATTCTAATGTCCTCAGCAGTCCCCTCTAGAGAACATTCAGCAATAAGCTCAGGTGGAAGGAGGAGCATGCTGAAGCTAGCACAACGCATGACGAACAATTTCTGTGCTGGTGTTTGTGCCTCCACGGTGCACAAGTGGAACAAGCTGAACGCGGGGAACGTGGGGGAGGACGTGAGGGTGATGACAAGGAAGAGCGTGGACGACCCAGGCGAGCCGCCGGGTATTGTCCTCAGCGCGGCCACCTCAGTGTGGCTGCCGGTGTCGGCGCAAAGACTCTTCGACTTCCTGCGCGACGAGCGGCTCCGGAGTGAGTGGGACATTCTCTCGAACGGTGGACCCATGCAAGAGATGGCTCACATTGCCAAGGGACAAGACCATGCTAACTGTGTCTCCCTCCTCAGAGCCAGTGCTATGAATGCCAACCAGAGCAGCATGTTGATTTTGCAGGAGACGTGCACCGACGCGTCGGGATCGCTTGTGGTGTACGCGCCGGTGGACATTCCCGCCATGCACGTGGTGATGAACGGCGGTGACTCTGCCTACGTGGCGCTTCTTCCGTCTGGGTTCGCCATCGTTCCAGATGGATCCGTGTCCGGCGGAGAACACGGAGGCGCGTCGCAGAAGAGGGCGAGTGGATGTCTTCTGACGGTTGCGTTTCAGATTCTCGTGAACAGTCTCCCGACGGCGAAGCTGACGGTGGAGTCGGTGGAGACCGTGAACAACCTCATCTCGTGCACCGTGCAGAAGATCAAAGCAGCGCTTCACAGCGAGAGTTGA 2451 0.5084 MSFGGFLEAKQSGGGGRIVSDIPYSNGSNHSNDIMPSGAISQPRLATPTLAKSMFNSPGLSLALQSDVDGQGDMNRLMPENFEQNGLRRSREEEHESRSGSDNMDGASGDDFDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSMREAMRNPMCSNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLTNSIGPPLPNSSLELGVGSNGFGGLSTVPSTLPDFGVGISSPLAMMSPSTRPTATSTVVTPGLDRSVERSIVLELALAAMDELVKMAQTGEPLWIRSLEGGREILNYEEYTRTMTPCIGLRPNGFVTEASRQNGMVIINSLALVETLMDSNRWSEMFPCMIARTSTAEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDTIRETSGPPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGTGFGAQRWVATLQRQCECLAILMSSAVPSREHSAISSGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSAQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHANCVSLLRASAMNANQSSMLILQETCTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGSVSGGEHGGASQKRASGCLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHSES* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0737 816 SMART START_1 332 556 IPR002913 GO:0008289
Pvu8g0737 816 Pfam START domain 332 556 IPR002913 GO:0008289
Pvu8g0737 816 Gene3D - 108 194 - -
Pvu8g0737 816 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 66 813 IPR042160 -
Pvu8g0737 816 MobiDBLite consensus disorder prediction 66 128 - -
Pvu8g0737 816 ProSiteProfiles 'Homeobox' domain profile. 118 178 IPR001356 GO:0003677
Pvu8g0737 816 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 66 813 - -
Pvu8g0737 816 Coils Coil 172 207 - -
Pvu8g0737 816 SMART HOX_1 119 182 IPR001356 GO:0003677
Pvu8g0737 816 SUPERFAMILY Bet v1-like 584 809 - -
Pvu8g0737 816 ProSitePatterns 'Homeobox' domain signature. 153 176 IPR017970 GO:0000981|GO:0006355
Pvu8g0737 816 Coils Coil 809 816 - -
Pvu8g0737 816 MobiDBLite consensus disorder prediction 85 101 - -
Pvu8g0737 816 CDD START_ArGLABRA2_like 327 555 - -
Pvu8g0737 816 Pfam Homeodomain 121 176 IPR001356 GO:0003677
Pvu8g0737 816 CDD homeodomain 120 178 IPR001356 GO:0003677
Pvu8g0737 816 SUPERFAMILY Bet v1-like 326 556 - -
Pvu8g0737 816 SUPERFAMILY Homeodomain-like 104 178 IPR009057 -
Pvu8g0737 816 ProSiteProfiles START domain profile. 323 559 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0737 Pvu-Chr8 6744457 6750834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0737 1 816 Homeobox Transcription Factor Family AT3G61150 65.426 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pvu8g0737 START 2.1e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0737 K09338 - gmx:100787537 1503.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0737 8 6744457 6750834 Pvu8g0737 8 6744457 6750834 ECH
Pvu8g0737 8 6744457 6750834 Pvu10g0941 10 33488656 33495230 PCT