Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0727 ATGTTTTGGTACTTCAGTTTTGTTGGTCGAGTCATGCTTTCAGTAAACAAGCTTTGTGTGTGCTCATATGAGATTCTCGAAGTTGTTGGGGCTAATCATCAGTTCTGCGCCTACCGAACCAAAACCATGGTGGAAGATGGTGATGCAGTTGATGCACGGTCCACAGAAGAGTGGTTGTTGCATGCACAGGAACTTGTTCCCGTTGTTCTTGAGAAGGCAAGAGAGGTTAAGGGATTTGCTGGTAGATGGAAGATGATCATTGCAAAATTGGAACAGATCCCCTCAAGATTATCAGATTTGTCAAGCCATCCGTGCTTCTCAAAAAATGCTCTGTGCAAGGAGCAGTTGCAGGCTGTGTCGAAGACACTGGGGGAAGCGATTGAATTAGCTGAGTTGTGTATGAAGGAGAAGTATGAGGGTAAGCTTCGGATGCAGAGTGATCTAGATGCATTGACTGGGAAGCTTGATTTGAATTTGCGGGATTGTGGGCTTTTGATCAAAACTGGTGTGCTGGGTGAGGCTACTTTACCATTGGCTGTGTCTAGTTCTGTGGCAGAATCAGATGTTGCAGCACACAACATAAGGGAATTGCTGGCGCGCCTTCAGATTGGCCACTTGGAAGCGAAGCACCAAGCTCTAGACAGCGTTGTTGAGGCCATGAAGGAAGATGAGAAGAGTGTTTTAGCTGCTCTTGGTCGGAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGAATAAGAGAGAAAACAGTTACTGTTATATGCTCGCTTGCGGAATCTGGTAGTTGCGAAAATTGGCTAGTTTCCGAGGGAGTTCTGCCACCTCTTATAAGGCTTGTTGAATCTGGCAGTGCAGTGGGGAAGGAGAAGGCCACAATATCCCTTCAGAGGTTGTCTATGTCAGCTGAAACAGCTCGTGAAATTGTGGGGCATGGTGGGGTTCCTCCATTGGTTGAACTTTGTCAAATTGGTGACTCTGTGTCACAGGCTGCAGCTGCTTGTACTCTGAAGAACATATCAGCTGTGCCTGAGGTGAGACAAACTTTGTCTGAAGAAGGGATTGTGAGGATCATGATCAATCTGCTTAACTGTGGAATTCTATTAGGTTCCAAAGAGCATGCTGCAGAATGTTTGCAGAATCTCACTGCAAGCAATGAGAATCTAAGGAGGAGTGTCATATCAGAAGGTGGAGTCAGGAGTCTTCTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCCGCTGTTGGAGCATTGAGAAATTTGGTCGGATCGGTCCCAGAGGAATCCTTGGTCTCTCTTGGTTTGGTCCCCCGATTGGTTCATGTGTTGAAGTCCGGATCCTTAGGTGCTCAGCAAGCCGCCGTAGCCGCAATATGCCGAGTTTGCAGCTCCACAGACATGAAGAAAATGGTTGGTGAAGCTGGTTGCATCCCTCTCCTTGTGAAAATGCTTGAGGCCAAGTCAAACAGTGCTAGAGAGGTTGCTGCTCAAGCAATCGCAAGCCTGATTGTTGTGTCTCAGAATACGAGAGAAGTTAAGAAGGATGATAAAAGTGTGCCAAACTTGGTTCAGTTGCTTGATCCAAGTCCTCAGAACACTGCAAAAAAATATGCAGTCACTTGCCTTGGATCACTTTCTTCAAGTAAGAAATGTAAGAAGCTAATGATCTCGTATGGGGCAATTGGGTATCTGAAGAAACTTACTGAGATGGACATTCCAGGAGCTAAAAAGCTACACGAACGGTTGGAAAGAGGAAAATTAAGAAGTTTGTTTAGCAAGAAATAG 1797 0.458 MFWYFSFVGRVMLSVNKLCVCSYEILEVVGANHQFCAYRTKTMVEDGDAVDARSTEEWLLHAQELVPVVLEKAREVKGFAGRWKMIIAKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCMKEKYEGKLRMQSDLDALTGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDVAAHNIRELLARLQIGHLEAKHQALDSVVEAMKEDEKSVLAALGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETAREIVGHGGVPPLVELCQIGDSVSQAAAACTLKNISAVPEVRQTLSEEGIVRIMINLLNCGILLGSKEHAAECLQNLTASNENLRRSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPEESLVSLGLVPRLVHVLKSGSLGAQQAAVAAICRVCSSTDMKKMVGEAGCIPLLVKMLEAKSNSAREVAAQAIASLIVVSQNTREVKKDDKSVPNLVQLLDPSPQNTAKKYAVTCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERLERGKLRSLFSKK* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0727 598 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 48 598 - -
Pvu8g0727 598 Gene3D - 184 374 IPR011989 -
Pvu8g0727 598 Gene3D - 375 432 IPR011989 -
Pvu8g0727 598 Gene3D - 433 577 IPR011989 -
Pvu8g0727 598 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 48 598 - -
Pvu8g0727 598 Pfam Armadillo/beta-catenin-like repeat 469 506 IPR000225 GO:0005515
Pvu8g0727 598 Pfam Armadillo/beta-catenin-like repeat 309 345 IPR000225 GO:0005515
Pvu8g0727 598 SMART arm_5 388 427 IPR000225 GO:0005515
Pvu8g0727 598 SMART arm_5 223 263 IPR000225 GO:0005515
Pvu8g0727 598 SMART arm_5 346 387 IPR000225 GO:0005515
Pvu8g0727 598 SMART arm_5 468 508 IPR000225 GO:0005515
Pvu8g0727 598 SMART arm_5 428 467 IPR000225 GO:0005515
Pvu8g0727 598 SMART arm_5 509 551 IPR000225 GO:0005515
Pvu8g0727 598 SMART arm_5 305 345 IPR000225 GO:0005515
Pvu8g0727 598 SUPERFAMILY ARM repeat 194 575 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0727 Pvu-Chr8 6531160 6534940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0727 438 581 U-box Gene Family AT3G54790 28.472 6.65e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0727 - - gmx:100789140 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0727 8 6531160 6534940 Pvu8g0727 8 6531160 6534940 ECH
Pvu8g0727 8 6531160 6534940 Pvu10g0961 10 33946754 33950212 PCT