Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0709 ATGGCGAGCCCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTGCAGGTAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGATTCCAAACGAGGGTTTGGAATCTTTTCTGAAAAAGATGTTTCTGATGGGGTTGTGTTGGTTGTTCCACTAGATTTAGCCATTACTCCAATGAGGGTGTTGCAAGATCCTCTTATGGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTAGATGACAGGTTACTAATGATGCTGTTATTGACTGTGGAGCGTTTGCGTAAGAATTCTCTATGGAAGCCGTACCTTGACATGCTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGATGAACTTAAAGAACTAAGAGGAACAACATTATATCGCGCGACTGAATTGCAGAAGAAAAGCCTGCTTTCTCTGTATGAAACTAAAGTGAAGGATACAGTGAAGAAACTTTTGACTCTTGATGGAAATTCAGAGATTGAGGTGTGCTTTGAAGATTTCCTTTGGGCGAATTCAGTATTTTGGACCCGTGCTTTGAACATTCCAATGCCTCGATCCTATGTATTTCCAGAAATGCAAGATGATCATGACAGTTGCATTCCTGAAGCTGATGAAAAAAGTAGCCAGGTTAAAAAATCTAACAATTTGACCAAGGAAGTGACATCTACCAGTTACACAATGACAGGAGAAACAGTTTGGGTTGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTGAAGCCAATAGCAACATGGGAAGTTGATGGAACTGGTTTAGCAACAGGAATTCCTTTCTCCATGTATCTTACTTTAGCTGCTCAAAGTCCCTTACGGAATGACCAAGAAATTTCCATTAGTTATGGAAACAAGGGAAATGAGGAACTTCTGTATCTGTATGGTTTTGTCATTGATGACAACACAGATGACTATGTCATGGTCCACTATCCAGCAGAAGCAATGAATACTATTTCCTTTTCAGAGTCCAAAGGGCAGCTTCTTGAAGTGCAGAAGGCTGAAATGAGATGTCTTTTACCCAAAACCTTTCTAGATAATGGGTTTTTTCCACTCGGAACTCAAACCAGTGGAGAAGATAACAAGGAAAAAGCTGACCAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGACGCCATCTTATGCAAACAAGCTGGTGTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGAAGAGCTTTACAAGGTTTCATCAATGCTGGAAGAGCTTGCTGGATCTGAAAGGGAGAGAGAACTATCAGATACAGATGTCCAATCAGCAGTGTGGGAGGTCTGTGGTGATTCTGGAGCTTTACAATTGCTTGTTGATCTTCTTCGTGTGAAGATGATGGATCTTGAAGAGAATTCTGGAACAGATGAAAATGACCTTGATTTACTCAGGAAAGCCCTTATTATTGATAGCCAGGAAGACAGCAAACAATGCACCGGCAATTTAAGCATAAAGACAAATGACTCTGAGGAACCAAAGTTGATGACTACAAACAAGTGGTCTGCTATAGTATATCGGCGTGGACAGAAGCAGCTAACAAGGTTATTCTTGAAAGAAGCAGAACATGCTTTGCAGTTATCACAGAATGAAGAAGAGGTGATTTCATGTTAA 1683 0.413 MASPEEAKLETFMQWLQVNGVELRGCKIKWCDSKRGFGIFSEKDVSDGVVLVVPLDLAITPMRVLQDPLMGPACRAMFEEGDVDDRLLMMLLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDDELKELRGTTLYRATELQKKSLLSLYETKVKDTVKKLLTLDGNSEIEVCFEDFLWANSVFWTRALNIPMPRSYVFPEMQDDHDSCIPEADEKSSQVKKSNNLTKEVTSTSYTMTGETVWVEGLVPGIDFCNHDLKPIATWEVDGTGLATGIPFSMYLTLAAQSPLRNDQEISISYGNKGNEELLYLYGFVIDDNTDDYVMVHYPAEAMNTISFSESKGQLLEVQKAEMRCLLPKTFLDNGFFPLGTQTSGEDNKEKADQVCNYSWSGQRKTPSYANKLVFPEKFMTTLRTIAMQEEELYKVSSMLEELAGSERERELSDTDVQSAVWEVCGDSGALQLLVDLLRVKMMDLEENSGTDENDLDLLRKALIIDSQEDSKQCTGNLSIKTNDSEEPKLMTTNKWSAIVYRRGQKQLTRLFLKEAEHALQLSQNEEEVISC* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0709 560 CDD SET_LSMT 32 313 - -
Pvu8g0709 560 Gene3D set domain protein methyltransferase, domain 1 5 313 - -
Pvu8g0709 560 Pfam SET domain 36 299 IPR001214 GO:0005515
Pvu8g0709 560 PANTHER SET DOMAIN-CONTAINING PROTEIN 4 555 - -
Pvu8g0709 560 SUPERFAMILY SET domain 8 317 IPR046341 -
Pvu8g0709 560 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 555 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0709 8 324 NAC Transcription Factor Family AT3G56570 23.919 1.17e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu8g0709 SET 1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0709 - - vun:114183365 1007.67