Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0653 ATGCTTACGTTGACATGGGCAGATACTCATGTGTTTATTACGAATAGTCTGGAGGGAAAAGAAGATCTACACATTCACTGCAAATCCAAAGATGATGATCTTGGACCGCATGTTCTCCGTATTAATCAAACCTTCAAAATTACTTTTGAGCCTAACTATTTCTTTGGAACACTCTTCTTTTGTTCGTTTCAATGGGGAAATTGTCCTTTCTTGTACTATGATGTATACAACCAAGGTAAGGATTACTACAAGTGTGATGATGATTGTACATGGTATGTTCATAAAGATGGACCATGTAGGTACGAATTTCAAGCTCGCAAATGTTATGCATGGAACACTTAA 342 0.3684 MLTLTWADTHVFITNSLEGKEDLHIHCKSKDDDLGPHVLRINQTFKITFEPNYFFGTLFFCSFQWGNCPFLYYDVYNQGKDYYKCDDDCTWYVHKDGPCRYEFQARKCYAWNT* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0653 113 PANTHER - 4 111 IPR010264 -
Pvu8g0653 113 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 4 111 - -
Pvu8g0653 113 Pfam Plant self-incompatibility protein S1 10 111 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0653 Pvu-Chr8 5852621 5852962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0653 9 113 Carbohydrate Esterase AT3G16970 38.739 4.92e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0653 - - pvu:PHAVU_008G064600g 213.001