Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0650 ATGCTTACTTTGGCATGTGCAGAACGTACTAATGTGTTTATTACGAATAGTCTGGAGGGAAGAGAAGATCTAAACCTTCATTGCAAATCCAAAGATGATGATCTTGGACAGCATCTTCTCCATATTAATCAAAGTTTCAAAATGAGTTTTCGAACTAAGATTTTCTATGGAACACTCTTCTTTTGTTCGTTTCAATGGGGAAATGGTCCCGTGTTACACTTTGATGTATACGACGAAATTAGGGATCAGCACAAGTGTGATGATGATGTTTGTAAATGGTATGTTCATAAAGATGGACCATGTAGGTACGAACCACAACTAGACTCCTCAGATCGCAAATGTTATCCATGGAACCATTAA 360 0.375 MLTLACAERTNVFITNSLEGREDLNLHCKSKDDDLGQHLLHINQSFKMSFRTKIFYGTLFFCSFQWGNGPVLHFDVYDEIRDQHKCDDDVCKWYVHKDGPCRYEPQLDSSDRKCYPWNH* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0650 119 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 6 106 - -
Pvu8g0650 119 Pfam Plant self-incompatibility protein S1 12 117 IPR010264 -
Pvu8g0650 119 PANTHER - 6 106 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0650 Pvu-Chr8 5827867 5828226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0650 9 118 Carbohydrate Esterase AT3G16970 42.478 1.18e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0650 - - pvu:PHAVU_008G064000g 268.085