Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0648 ATGAGTTTTCGAACTAAGATTTTCTATGGAACACTCTTCTTTTGTTCGTTTGAATGGGGAAATGGTCCTGTGTTGCACTTTGATGTATACGACCAAATTAGGGATCAGAACAAGTGTGATGATAATGTTTGTAAATGGTATGTTCATAAAGATGGACCATGTAGGTACGAACCACAACTAGACTCCTCAGATCGCAAATGTTATCCATGGAACCATTAA 219 0.3744 MSFRTKIFYGTLFFCSFEWGNGPVLHFDVYDQIRDQNKCDDNVCKWYVHKDGPCRYEPQLDSSDRKCYPWNH* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0648 72 PANTHER S-PROTEIN HOMOLOG 18-RELATED 2 70 - -
Pvu8g0648 72 Pfam Plant self-incompatibility protein S1 2 70 IPR010264 -
Pvu8g0648 72 PANTHER - 2 70 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0648 Pvu-Chr8 5819634 5819852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0648 3 71 Carbohydrate Esterase AT3G16970 43.056 1.24e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0648 - - pvu:PHAVU_008G063800g 171.785