Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0642 ATGCTTACGTTGACATGGGCAAATAATCATGTGTTTGTTACGAATCATCTGGAAGGAAAAGAAGATCTAAACATTCACTGCAAATCCAAAGATGATGATCTTGGACCGCATGTTCTCCATATTAATCAATACATCAGAATTACTTTTCAGCCTAACTTTTTCTTTGGCACACTCTTCTTTTATTACTACAAATGTGATGCTGATTGTAAATGGTATGTTCATAAAGATGGACTATGTAGGAATGAACAACAAGATAACTCGTCATATGTTCGCAAATGTTATCCATGGAAACAGTAA 297 0.3434 MLTLTWANNHVFVTNHLEGKEDLNIHCKSKDDDLGPHVLHINQYIRITFQPNFFFGTLFFYYYKCDADCKWYVHKDGLCRNEQQDNSSYVRKCYPWKQ* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0642 98 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 4 85 - -
Pvu8g0642 98 Pfam Plant self-incompatibility protein S1 10 60 IPR010264 -
Pvu8g0642 98 PANTHER - 4 85 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0642 Pvu-Chr8 5742226 5742583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0642 11 96 Carbohydrate Esterase AT3G16970 32.407 2.11e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0642 - - pvu:PHAVU_008G064600g 132.109