Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0632 ATGGCGGTGGTGAGTCCCGTGCCTGCAACATCACAAAGGATGGGTTCTGTGAGGTCACCTTCTGATGCTAGTGGGGAAATTTTGGAGGAGCCTAATCCAGGTGTGGTTGATCAGCCAATCTATGTTGCTGTGACAAAAGAAGTGAAGGAGAGCAAATTAAATCTGATATGGGCAATACAACACTCTGGAGGAAAGAGGATTTGCATTCTTTATGTTCATGTTCGTGCAACAATGATCCCCCTACTGGGAGGTAAATTCCCCGCAAATGCACTAAGAGAGGAGCAGGTTCAAGCATACTGGGAAGAGGAAAAGCAAGGCATGCATAGGACTCTAGACGAATATCTTCAAATCTGTCGACGGATGGGGGTGCAAGAAGAAAAACTGCACATTGAAATGGATAGCATTGAAAAAGGAATTGTAGAACTTGTCTCTCAGCATGACATCCGAAAGCTTGTAATGGGAGCAGCATCAGATAAGTACTATAATAGGAAAATGATGGACCTTAGGTCTAAGAAAGCCATCTATGTGTGTAAACAAGCTCCAGCTTCTTGTCACATACAGTTTATCTGCAAAGGGCACCTTATACACACAAGGGATCAGAGTTTGAATGAAGGTAATGTAGAGGTTGCATCTCCTTTGGTGCAGCAAGTGCCAAACTCTGTGAGAACTTTCAGATCACAGTCTGTTACACTGGGGCAAGATCGCCGAGCAAATCTAACCAATCATGCACTAGAATTTTTACGCAGAGTAAGGTCTGTCAGTGATGGACATGGAGCAAGCTTTCCGGCTGTTTCTTCTCCAGAAGAAACTGAAGGGTTTTCAACTCCACGTGACAGGATGGGTACAGAAGTAAGTTCTGATGAATCAGATAGGCTGTCAAGGATGAGTCCTTCTGGCTTGTCAATGTGCTCTGATAGTGCAGTTGAGCTAGCTACCCCAAGATTGATTACTGAAAGGAGTGAGAATGCATTAGAGTTGACTTTGAGTCAGCTGGTCATAGAGGATCTTCATCATTCATCTCCTCCTAGTACAGTGGACAGTGGAATAGATGATACTATCTATGACCAGCTTCAACAGGCTATGGCTGAGGCTGAGGATGCTTCGCTAACTGCGTATAAAGAAACTGTAAGGCGTAGGAATGCTGAAAAAGAAGCCATTGAAGCTATACGCAAGGCTAAAGCTTCTGAAAGCTTATATAGAGAGGAGTTGAACCTGAGGAAATTGGCAGAGGAAGAACTTAGGAAAGAAAAAGAAGATCTTGAGAATGCAAAGAGCCTGAGAGACAAAGTTAGGGAAGAACTCCACCTCGCCCTTGATCAGAAGGCGTCTCTGGAGAGTCAGATTGCATCATCTGAACTTATTATAAAGGAGCTGGAGCAGAAGATTGTATCTGCTGTGGATCTGTTACAGAGCTACAAGAATGAACGAGAGGAATTGCAGATTCAGCGTGATAATGCATTGAGAGAGGCTGAAGATTTGAGAAAAAAGCAAGGAGAGGCCTCAAGCTCCCATGTCCCTCAATTTTTCTCAGAATTCTCTTTTTCAGAGATTAAAGAAGCAACAAATAACTTCAATCCATCCTTAAAAATTGGACAAGGTGGATATGGAAGTATATTTAAAGGTGTCTTGAGTTACACTGAGGTGGCTATAAAAATGTTGCACTCTGACAGCATGCAAGGACCCTTGGAGTTTCAACAGGAGGTTGATGTGTTGAGCAAGCTAAGGCATCCCAATCTTATCACACTCATTGGAGCCTGCCCAGATGCATGGGCTCTTGTCTATGAGTATTTACCCAATGGAAGCCTTGAAGATCGCCTTGCCTGCAAGGATAATACCCCTCCATTATCATGGCAAACTCGAATTCGCGTTGCCACTGAACTATGCTCTGCCCTCATCTTTCTCCATTCCAGTAAACCTCACAGCATAGTGCATGGTGACTTGAAACCCTCCAACATTCTGCTTGATGCAAACCTTATTAGCAAGCTTAGTGACTTTGGAATATGTCGTATATTATCAAACTATGAAAGTTCCAGTAGAAATTCTACACAGTTTTGGAAAACTGACCCAAAAGGAACATTTGTCTACATGGATCCTGCATTTCTTGCCTCAGGGGAACTTACTCCGAAGTCAGATGTTTATTCGTTTGGAATCATATTGTTGAGATTGTTGACTGGGAGACCAGCCTTGGGAATAACAAAGGAAGTGAAATATGCATTAGACACTGGAAAGTTGAAATCCCTATTGGATCCTTTGGCTGGAGACTGGCCATTTGTGCAGGCTGAACAATTGGCTCGCCTGGCTTTGAGATGTTGCGATATGAACCGAAAGAGCCGGCCAGATCTTTATTCTGATGTCTGGAGGATACTTGATGCAATGAGGGTTTCTTCTGGAGGCACAAACTCCTTTGGACTAAGTTCTGAAGGACTTTCACAACATCCATCATATTTTATTTGCCCAATCTTCCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGGTTTTACTTATGAAGCTGAGGCTATACGAGGATGGCTTGATGGTGGTAATGACAACTCACCAATGACTAATAGTAAGCTTGCACATCACAATCTTGTTCCCAATCGCGCTCTTCGCTCTGCAATCCAGGATTGGCTTCAAAACCACTGA 2649 0.4349 MAVVSPVPATSQRMGSVRSPSDASGEILEEPNPGVVDQPIYVAVTKEVKESKLNLIWAIQHSGGKRICILYVHVRATMIPLLGGKFPANALREEQVQAYWEEEKQGMHRTLDEYLQICRRMGVQEEKLHIEMDSIEKGIVELVSQHDIRKLVMGAASDKYYNRKMMDLRSKKAIYVCKQAPASCHIQFICKGHLIHTRDQSLNEGNVEVASPLVQQVPNSVRTFRSQSVTLGQDRRANLTNHALEFLRRVRSVSDGHGASFPAVSSPEETEGFSTPRDRMGTEVSSDESDRLSRMSPSGLSMCSDSAVELATPRLITERSENALELTLSQLVIEDLHHSSPPSTVDSGIDDTIYDQLQQAMAEAEDASLTAYKETVRRRNAEKEAIEAIRKAKASESLYREELNLRKLAEEELRKEKEDLENAKSLRDKVREELHLALDQKASLESQIASSELIIKELEQKIVSAVDLLQSYKNEREELQIQRDNALREAEDLRKKQGEASSSHVPQFFSEFSFSEIKEATNNFNPSLKIGQGGYGSIFKGVLSYTEVAIKMLHSDSMQGPLEFQQEVDVLSKLRHPNLITLIGACPDAWALVYEYLPNGSLEDRLACKDNTPPLSWQTRIRVATELCSALIFLHSSKPHSIVHGDLKPSNILLDANLISKLSDFGICRILSNYESSSRNSTQFWKTDPKGTFVYMDPAFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVKYALDTGKLKSLLDPLAGDWPFVQAEQLARLALRCCDMNRKSRPDLYSDVWRILDAMRVSSGGTNSFGLSSEGLSQHPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDGGNDNSPMTNSKLAHHNLVPNRALRSAIQDWLQNH* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0632 882 PANTHER OS02G0152300 PROTEIN 28 881 - -
Pvu8g0632 882 Coils Coil 354 374 - -
Pvu8g0632 882 CDD RING-Ubox_WDSUB1_like 816 857 - -
Pvu8g0632 882 MobiDBLite consensus disorder prediction 1 30 - -
Pvu8g0632 882 PANTHER U-BOX KINASE FAMILY PROTEIN 28 881 - -
Pvu8g0632 882 SUPERFAMILY Protein kinase-like (PK-like) 501 782 IPR011009 -
Pvu8g0632 882 SUPERFAMILY RING/U-box 806 881 - -
Pvu8g0632 882 MobiDBLite consensus disorder prediction 272 290 - -
Pvu8g0632 882 CDD STK_N 39 192 - -
Pvu8g0632 882 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 811 882 IPR013083 -
Pvu8g0632 882 ProSitePatterns Protein kinases ATP-binding region signature. 530 551 IPR017441 GO:0005524
Pvu8g0632 882 Pfam U-box domain 813 882 IPR003613 GO:0004842|GO:0016567
Pvu8g0632 882 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 55 157 - -
Pvu8g0632 882 ProSiteProfiles U-box domain profile. 811 882 IPR003613 GO:0004842|GO:0016567
Pvu8g0632 882 MobiDBLite consensus disorder prediction 257 304 - -
Pvu8g0632 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Pvu8g0632 882 Gene3D Phosphorylase Kinase; domain 1 494 596 - -
Pvu8g0632 882 Coils Coil 399 496 - -
Pvu8g0632 882 ProSiteProfiles Protein kinase domain profile. 524 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0632 882 SMART Ubox_2 815 878 IPR003613 GO:0004842|GO:0016567
Pvu8g0632 882 Gene3D Transferase(Phosphotransferase) domain 1 597 800 - -
Pvu8g0632 882 Pfam Protein kinase domain 528 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0632 882 Gene3D HUPs 40 184 IPR014729 -
Pvu8g0632 882 SMART serkin_6 524 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0632 Pvu-Chr8 5642855 5650476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0632 1 882 U-box Gene Family AT2G45910 52.242 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pvu8g0632 Pkinase 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0632 - - gmx:100807515 1508.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0632 8 5642855 5650476 Pvu10g1037 10 35339508 35344731 PCT