Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0623 ATGCTGGATTTCGTAGGCCCAGTTCTGGACATCATAATTCGGTTGTGGGACTGTTGTGCCTTCGTCCGTGAGTATGAAGAGAACCTTTCTTGTTTGAGGGACATGGCATCTGATCTTCAGGGCCTTTGGGTTGATGTCACTGTGAAGGTTCAACTGGCTGAGGCACAACACTTGAGGCGTCTGAATGAGGTGAATGATTGGTTGGGTAAAGTTGAAGCCATGCAAAGAGAAGTCCAAGCTATTCAGCAGAGAGTTGCTCATGTTCAAGAAACACGTAGCAGATGCTTGGCAAATTTTCCAACAAGCTGCAGGATGGGAAGGATTGTAACTCAAAAAATAGGTGAGATTCGTAAACTTATTGATAAAGGGCACTTTGATGTAGTGGCTCAGGAAATGCCATATGCTTTGGTAGATGAAATCCCTCTAGAGGTCACAATTGGTCTAGAATCAACCTTTGATGAACTTGGTAAATGTTTTGATGATAATAATATGGGAATTATTGGCTTGTTTGGTATGGGGGGTGTAGGAAAGACAACTCTGCTAAAAAAGTTCAACAATGAGTTCCTTCCCCAAAAATTTTATGATGCAGTCATTTGGGTTGTGGTGTCTAAAGAAGCAGATGTAGGAAGTGTTCAACAAAGCATTGGTGACAAATTAAATGTTCCTGTTGGTAAATGGGGTGGTAAGACTATTAATGACAGAGCTATTGTTTTATACAACTTTTTGAAGAGGAAGAAGTTTGTGTTGATGCTAGATGATTTATGGGAGCGTATGGATCTTCTGAAGTTGGGGATTCCTATCCCTGATATGGAAAACGGATCTAAAGTGATATTCACAACAAGGTCCATGGAGGTTTGCAGGAACATGGAAGCCAACAGATGCATCAAAGTAGAGTGTTTGGCACAAGAGGAAGCATTTGAATTGTTCAGAGAGAAAGTGGGTGAAGAAACTCTCAACTCTCATCCTGAAATATTTCCTCTGGCTCAAATTTTGGCCAAGGAGTGTCAGGGGCTTCCTCTAGCGCTCATCACTGTCGGAAGATCTATGGCTCGAAAGACTCACCCTGAATGGAAACGAGCAGCACGAACCTTGAAGATTTATCCATCAAGATTTTCAGGTATGGTTGACTATGTCTATTGTTTGCTTGAGTTTAGCTATGACAGTTTACCAAGTGCCACACACAAGTCTTGTTTCTTGTACTGTTGCATCTTCCCTGAGGACTATGACATTAGAAAAGATGAACTAATTCAACTGTGGATTGGGGAAGGTCTTTTATCTGAATTTGGTGATGATGTCTATGAAGCGCGCATTCAAGGAGAAGAAATCATCGCAAGCTTGAAGTTTGCTTGTTTGTTGGAGGACAGTGAGAGAGAAAATAGGATTAAGATGCATGATGTGATCAGGGACATGGCTTTGTGGCTAGCCTGTGATCATGGATCCAACACCAGATTTTTGGTGAGAGATGGCGCAAGCAGCGGTTCACTTGAAACATATAATCAGGCAAAGTGGAAAGAAGTAGAGAAAGTATCAATGTGGAGGAACAGCTGTCAGAAACTCTCAGGAAAACCAGATTGCTCAAGTCTCTTGACTATGCTCGTTAGAAATACCGAGATCACCAACTTCCCAGATGAGATCTTTCTGACTGCAAACCATCTTAGAGTGTTAGACTTGTCAGGCAATAAAAGAGTAAGAGAATTACCTTCCAGTATTGGGGAGTTAGTTGAATTGCAGCATTTGGATCTATCAGGTACTGATATAGAAAAATTGCCAAGGGAGCTCCAGAACTTGAAAAAATTGAGATGCCTGCTGCTGAATTATATTTGCAATAGGCTTGTCTTCCCAAGGAGTTTGATATCAAGTTTGGTGTCATTGCAAGTGTTTAGCAAATTACCATGGGAAGATCAGTTTATTCTTCCTGATTTAGGGGAACCTGAGGAAACTGTCTTGTTGAAAGAACTGGAATGTTTGGAATACCTTCAAGACATAAGCATTGCTCTCTTTTGCTTTTCATCCATGCAGGTATTACTCGAATCTCCCAAATTGCAAAGATGCATTAGACATCTGAGAATAATTTCTCCTTTCAATTCAACACCACAAGTTATATTATTCTCATTTTTGACAAAAATGCAACATCTAGAGGTATTGTCCATGTCAATTTCTTCATCTTCAAGTTTAGACCATGTCAGGAAAAAGGAGTCTCCATCACAGGGTTCTATGATTGAGTCCATTCCTTTAAGTTCTAAGCTTACTGAGCATTGTTACCTTGTTGGCCTTCGTGAGTTATCCCTTGAAGGGTGTGGCATGTTCAACTTGAATTGGCTCACTCGTGCTCCAAGCCTTCAACTCCTTAGAATATACAATTGTCCCTCCTTGGAAGAAGTCATAGGTGAAGAATTTGGACATGCAGAAAATGTTTTTTCAAGTCTTGAAGTTATTGATCTAGATTCTTTGCCAAAGTTAAGGAGCATATGCTCACAGATTTTACAATTTCCTTGTCTTAAGGAGATCTGTGTAGCAAATTGTCCAAAGCTGATAAAGCTCCCTTTTGATTCCAATAGTGCAAGGAACAGTCTGAAGCACATAAATGGAGAGAAAAGGTGGTGGCGTAAATTGCAGTGGGAAGATGAAGCCACAAGGGATCACTTTGGTTCAAAATATGTAGCATTGCGTAAAATTCGCCAAATAAGTTGA 2691 0.4054 MLDFVGPVLDIIIRLWDCCAFVREYEENLSCLRDMASDLQGLWVDVTVKVQLAEAQHLRRLNEVNDWLGKVEAMQREVQAIQQRVAHVQETRSRCLANFPTSCRMGRIVTQKIGEIRKLIDKGHFDVVAQEMPYALVDEIPLEVTIGLESTFDELGKCFDDNNMGIIGLFGMGGVGKTTLLKKFNNEFLPQKFYDAVIWVVVSKEADVGSVQQSIGDKLNVPVGKWGGKTINDRAIVLYNFLKRKKFVLMLDDLWERMDLLKLGIPIPDMENGSKVIFTTRSMEVCRNMEANRCIKVECLAQEEAFELFREKVGEETLNSHPEIFPLAQILAKECQGLPLALITVGRSMARKTHPEWKRAARTLKIYPSRFSGMVDYVYCLLEFSYDSLPSATHKSCFLYCCIFPEDYDIRKDELIQLWIGEGLLSEFGDDVYEARIQGEEIIASLKFACLLEDSERENRIKMHDVIRDMALWLACDHGSNTRFLVRDGASSGSLETYNQAKWKEVEKVSMWRNSCQKLSGKPDCSSLLTMLVRNTEITNFPDEIFLTANHLRVLDLSGNKRVRELPSSIGELVELQHLDLSGTDIEKLPRELQNLKKLRCLLLNYICNRLVFPRSLISSLVSLQVFSKLPWEDQFILPDLGEPEETVLLKELECLEYLQDISIALFCFSSMQVLLESPKLQRCIRHLRIISPFNSTPQVILFSFLTKMQHLEVLSMSISSSSSLDHVRKKESPSQGSMIESIPLSSKLTEHCYLVGLRELSLEGCGMFNLNWLTRAPSLQLLRIYNCPSLEEVIGEEFGHAENVFSSLEVIDLDSLPKLRSICSQILQFPCLKEICVANCPKLIKLPFDSNSARNSLKHINGEKRWWRKLQWEDEATRDHFGSKYVALRKIRQIS* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0623 896 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 401 IPR027417 -
Pvu8g0623 896 Gene3D - 300 385 IPR042197 -
Pvu8g0623 896 PANTHER OS12G0491200 PROTEIN 27 879 - -
Pvu8g0623 896 SUPERFAMILY L domain-like 453 862 - -
Pvu8g0623 896 Coils Coil 64 91 - -
Pvu8g0623 896 Gene3D Ribonuclease Inhibitor 487 867 IPR032675 -
Pvu8g0623 896 PRINTS Disease resistance protein signature 166 181 - -
Pvu8g0623 896 PRINTS Disease resistance protein signature 241 255 - -
Pvu8g0623 896 PRINTS Disease resistance protein signature 335 349 - -
Pvu8g0623 896 PRINTS Disease resistance protein signature 547 563 - -
Pvu8g0623 896 Pfam NB-ARC domain 157 387 IPR002182 GO:0043531
Pvu8g0623 896 Gene3D - 135 299 IPR027417 -
Pvu8g0623 896 Pfam Leucine rich repeat 530 586 IPR001611 GO:0005515
Pvu8g0623 896 Coils Coil 22 42 - -
Pvu8g0623 896 Gene3D - 386 472 IPR036388 -
Pvu8g0623 896 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Pvu8g0623 896 PANTHER DISEASE RESISTANCE PROTEIN RP 27 879 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0623 Pvu-Chr8 5573334 5578271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0623 146 471 WRKY Transcription Factor Family AT5G45050 25.444 1.40e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0623 - K13459 pvu:PHAVU_008G061300g 1704.49