Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0613 ATGGAATCAAGATCGTTGAAAACCAAATCCAGTCACTTTATCATCTCCCATAACCCCCAATATATAAGCCCCACTCCCTCACTCACTCACTCGCATTTCCACAACACCCTTCCCACTTTCTCTCTCCAACCGCACAAACTCCTCCACTTTCTCTCTCCTAGACAAACAGCGCGTATCCCCCACGCGCCGATGGGATTTCCGGTAGGGTATCCGGAAGTGCTGGTCCCCAAGCTCTTCCTCAACGCGCTCTCGCTCCTCGCGTGGCTCCGCTCGCTCGTCGCCGCGCTCTTCCGCCTCCTCCGCCTCTCCGACCTCCTCGACACCGACGCCGCCGCGCTCGCCTGGCCGCCGGAGTCCCCGCCGCAGCGCGCTCCCACTCTCTCAGCAGTCCTCATCCGCGAGTTTCTCCCCGTGGCAGCGTTCCGTGACCTCGACGGCGCCGGCGAATCCCTTCCATCGCCGACTGGATGCGCGGTGTGCCTGAGCGAGTTCTGCGCGGAGGAGGAGATCAGGTGCATGGCGAACTGCAAACACATGTTCCACCGCGCGTGCGTGGACCGTTGGATCGATCACGATCAGAAGACGTGTCCTCTGTGTAGGACACCGTTCGTCCCCGAGCACAAGGTGGAGGAGTATAACCAACGACTATGGGCAGCTTCTGGTGTTTCGCAGTTTTACCAAGACGATTACACTCCTTCCCTCTGA 705 0.5972 MESRSLKTKSSHFIISHNPQYISPTPSLTHSHFHNTLPTFSLQPHKLLHFLSPRQTARIPHAPMGFPVGYPEVLVPKLFLNALSLLAWLRSLVAALFRLLRLSDLLDTDAAALAWPPESPPQRAPTLSAVLIREFLPVAAFRDLDGAGESLPSPTGCAVCLSEFCAEEEIRCMANCKHMFHRACVDRWIDHDQKTCPLCRTPFVPEHKVEEYNQRLWAASGVSQFYQDDYTPSL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0613 234 PANTHER RING ZINC FINGER PROTEIN-RELATED 64 231 - -
Pvu8g0613 234 Pfam Ring finger domain 157 200 IPR001841 -
Pvu8g0613 234 ProSiteProfiles Zinc finger RING-type profile. 157 200 IPR001841 -
Pvu8g0613 234 SMART ring_2 157 199 IPR001841 -
Pvu8g0613 234 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 64 231 - -
Pvu8g0613 234 SUPERFAMILY RING/U-box 150 208 - -
Pvu8g0613 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 205 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0613 Pvu-Chr8 5424167 5425749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0613 64 220 C3H Transcription Factor Family AT1G63840 44.937 9.19e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0613 K16281 - gmx:100813224 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0613 8 5424167 5425749 Pvu8g0613 8 5424167 5425749 ECH
Pvu8g0613 8 5424167 5425749 Pvu10g1055 10 35797672 35799722 PCT