LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g0602	ATGGCCACTGCTCCTTCGCTCCTGCACTCATCTGGGTCCTCATTTTTCTCTCAATTTCGTGCCTTTCCATTCTCTTCTTCCTCTTTAGTTTTCCCTCACGGAAACAGACATGGGAATGCAGTGGTGTCTGTGAGGGCATCTGATTCGGCAGTTGTGTTGGTGGAGAAGTCTGATGCAGAGAAGGCCAATAGGCTCAAAACAGCTTACAATGAAAAAGTTGTTCCCTTGCTCATAGAAGAGTTCTCTTACCCCAACAAGCACCAGGTGCCTAAAATTGAGAAGATTGTGGTTAACTGTGGTATTGGAGACGCTGCACAAAACTCAAAGGGTTTGGACGCTGCAATAAATGATCTAGCAATGATCACAGGGCAGAGACCTGTGAAGACTCGGGCTAGGGCTTCCCTTGCCACCTTTAAGATCAGGGAAGGTCAACCGCTTGGGATTGCTGTGACACTAAGAGGAAACATTATGTACTCATTCCTAGACCGAGTCATCAACTTGGGACTTCCGAGGACTAGAGATTTCCAAGGTGTGAACTCCAACAGCTTTGATGGGCATGGAAACTACAGCATTGGGGTAAAGGACCAGGGTGTATTCCCAGAGATCAGAGCTGATGTTGTTGGCAATCCTAGGGGAATGGACATCTGCATCACCACAACGGCTAATACTGATAAAGAAGGTCAAAGATTATTGGCTCTTATGGGTATGCCCTTCAGAGAGGGAAGTGGTTCTGCCGCGGCGGCACCGAAAAAGAAGCTTAAGTCTCATCATTTTGATTCAAAAAGGGGAGGAAGAGGAAGGAAGTGA	807	0.4709	MATAPSLLHSSGSSFFSQFRAFPFSSSSLVFPHGNRHGNAVVSVRASDSAVVLVEKSDAEKANRLKTAYNEKVVPLLIEEFSYPNKHQVPKIEKIVVNCGIGDAAQNSKGLDAAINDLAMITGQRPVKTRARASLATFKIREGQPLGIAVTLRGNIMYSFLDRVINLGLPRTRDFQGVNSNSFDGHGNYSIGVKDQGVFPEIRADVVGNPRGMDICITTTANTDKEGQRLLALMGMPFREGSGSAAAAPKKKLKSHHFDSKRGGRGRK*	269

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g0602	268	SUPERFAMILY	RL5-like	64	239	IPR022803	-
	Pvu8g0602	268	MobiDBLite	consensus disorder prediction	250	268	-	-
	Pvu8g0602	268	PANTHER	54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL	59	240	-	-
	Pvu8g0602	268	MobiDBLite	consensus disorder prediction	241	268	-	-
	Pvu8g0602	268	Pfam	Ribosomal protein L5	85	141	IPR031310	-
	Pvu8g0602	268	ProSitePatterns	Ribosomal protein L5 signature.	118	134	IPR020929	GO:0003735\|GO:0005840\|GO:0006412
	Pvu8g0602	268	Hamap	50S ribosomal protein L5 [rplE].	62	240	IPR020930	GO:0003735\|GO:0005840\|GO:0006412
	Pvu8g0602	268	Gene3D	-	56	240	IPR022803	-
	Pvu8g0602	268	Pfam	ribosomal L5P family C-terminus	145	238	IPR031309	-
	Pvu8g0602	268	PANTHER	60S RIBOSOMAL PROTEIN L11-RELATED	59	240	IPR002132	GO:0003735\|GO:0005840\|GO:0006412

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu8g0602	91	218	Cytoplasmic Ribosomal Protein Gene Family	AT5G45775	25.781	6.79e-06	43.9

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g0602	K02931		-	gmx:100818896	441.039

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