Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0598 ATGGAGCTTCTCAATATTCTTATCACAATCCTGCTCCTATATTTGTTCCCTCACTCGCAAAATTGCCAACAAGTATACCTCAACAACACTGTCTATGACTGCTCTAATGACCCTTCTGTATCTAAAGGATATCTTTGCAATGGCCTTCAAAACTCATGCACTTCCTTCTTACTTTACAGGTCCAAATCTCCCTATGACAACCCTGTGATCATTGCTTACCTTCTTGGCTCTGAAACATCTGATATAACCTCAATCAACAATATCTCAGCAACTCACAATATTCCTTCCAATAAGTCAATCATTGTTCCTGTCTTCTGTTCATGTTATGGAAACATCTACCAGTATGACACTCTTTACTCTGTCAAAGAGAATGATACCTACTGGGCGTTGGTAAAAGAAACCTTCCAAGGCCTCACCACCTGCCAAGCAATTATGGGTCAGAATTACTATCCTCCAACTGATATTGCAATTGATGCAGAGCTCAAGGTTCCAATGTTATGTGCTTGTCCCACTGCAAATCAGACTGCAAAAGGGGTCACCTCTTTGCTGGTTTACTCGGTCATCTCTGGTGACACTATTAAGTCCATAGGAGAGGCTTATGGCGTGGATGAACAAAGTATACTAGAGGCCAATAAGTTGTCAGTGCCACAGAGTGCAAATAGCAGCATGAGTCTCCTTGACTTCACACCTATTTTAGTTCCTCTAATAGGGAATAACTGCAAAGAGAACCCAAATGAATTCTACTGTAAATGTTACCGAGAGCCACAAACAGATGGAAGCTCCAAGGGGCTATTATGTGATGAATCTGGTGACAAAGAATTTCCTACAAGATTGGTTGCTGCTTTAGGTGTTGGAATTGGCGCAGGTTTTGTGTGTTTGTTTCTTTTGGGGTACAAATCATATCAATATATTCAGAAAAGGAGAGAAAGTATTCGTAAGGAAAGCTTATTCAGGCGAAATGGTGGATACTTGTTACAAGAGAAGCTCTCTTTTTATGGAAATGGAGAAATGGCAAAGCTGTTTAAAGCTGAGGAGCTACAGAAAGCAACAGATAACTATAACAAGAGTAGATTTCTTGGTCAGGGTGGCTTTGGCACTGTGTATAAAGGAATGCTACCAGATGGGACCATTGTTGCAGTTAAAAAGTCAAAAGAGATTGAAAGGAACCAGATTGAGACTTTTGTCAATGAAGTGGTGATTCTGTCCCAGATCAACCACAGAAACATTGTCAAACTCTTTGGTTGTTGTCTCGAGACAGAAACTCCTTTACTGGTCTATGAATTCATTCCCAATGGAACACTCTCTCACCATATCCACAGGAGAGACAATGAGCCCTCCCTTTCATGGGAGACTCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTTACATATATGCATTTTTCAGCTTCTATTCCCATTTTCCATAGAGACATCAAACCTACCAACATACTTTTAGACAGCAACTTCAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGACAAGACTCACTTGACCACAGCTGTAGGAGGGACTTTTGGGTACATAGACCCTGAATATTTTCAATCTAGTCAATTTTCAGATAAAAGTGATGTGTATAGTTTTGGAGTTGTGCTCGTAGAGCTCATAAGTGGGAGAAAGCCAGTTTCATTCTTAGAGGAAGATGAGGGTCAAAATCTGATTGCACAGTTTCTTTCTCTGAAGGATAACAAAGTTTATGAAATTTTAGATGGCAGGGTGGTTAAGGAAGCAAGAAAAGATGACATGCTTGTCATTGCAAACCTTGCAATGAAATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCAGTGGAATTAGAAGCATTGAGAAAACAATATATGATAGAAAAGGTTTATATTAATAATAAAAATTATTTTATATATTAA 1935 0.3948 MELLNILITILLLYLFPHSQNCQQVYLNNTVYDCSNDPSVSKGYLCNGLQNSCTSFLLYRSKSPYDNPVIIAYLLGSETSDITSINNISATHNIPSNKSIIVPVFCSCYGNIYQYDTLYSVKENDTYWALVKETFQGLTTCQAIMGQNYYPPTDIAIDAELKVPMLCACPTANQTAKGVTSLLVYSVISGDTIKSIGEAYGVDEQSILEANKLSVPQSANSSMSLLDFTPILVPLIGNNCKENPNEFYCKCYREPQTDGSSKGLLCDESGDKEFPTRLVAALGVGIGAGFVCLFLLGYKSYQYIQKRRESIRKESLFRRNGGYLLQEKLSFYGNGEMAKLFKAEELQKATDNYNKSRFLGQGGFGTVYKGMLPDGTIVAVKKSKEIERNQIETFVNEVVILSQINHRNIVKLFGCCLETETPLLVYEFIPNGTLSHHIHRRDNEPSLSWETRLRIACEVAGAVTYMHFSASIPIFHRDIKPTNILLDSNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVELISGRKPVSFLEEDEGQNLIAQFLSLKDNKVYEILDGRVVKEARKDDMLVIANLAMKCLRLNGKKRPTMKEVSVELEALRKQYMIEKVYINNKNYFIY* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0598 644 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 629 IPR045274 GO:0007166
Pvu8g0598 644 SUPERFAMILY Protein kinase-like (PK-like) 337 622 IPR011009 -
Pvu8g0598 644 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Pvu8g0598 644 PANTHER LYSM TYPE RECEPTOR KINASE 24 629 - -
Pvu8g0598 644 Pfam LysM domain 119 164 IPR018392 -
Pvu8g0598 644 Pfam LysM domain 185 216 IPR018392 -
Pvu8g0598 644 CDD STKc_IRAK 359 625 - -
Pvu8g0598 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Pvu8g0598 644 ProSiteProfiles Protein kinase domain profile. 353 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0598 644 Gene3D Phosphorylase Kinase; domain 1 325 428 - -
Pvu8g0598 644 Gene3D LysM domain 169 226 IPR036779 -
Pvu8g0598 644 SMART serkin_6 353 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0598 644 ProSiteProfiles LysM domain profile. 183 227 IPR018392 -
Pvu8g0598 644 Gene3D Transferase(Phosphotransferase) domain 1 429 641 - -
Pvu8g0598 644 Pfam Protein kinase domain 353 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0598 Pvu-Chr8 5261242 5263836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0598 283 636 Receptor kinase-like Gene Family AT1G16130 57.423 3.34e-141 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu8g0598 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0598 - - gmx:100795455 1014.22