Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0593 ATGGCCGAAGATTGGGATCTACATGCGGTGGTCAGAGGTTGCTCCACCATCACATCATCCTCCGTGTCTTCTTCTTCCTCCTCCTCCTCTGGTTTTGCCTCTTGTTACTTCCACCCTGAAGGTGTTTCCTCCTCGTCTTCTTCTTCTTCGGGCTTCTCTATCTTCAGAGGTGAACAAGGAAGCCAACTTTTGTCGCTTTCTGCGTACCCCTTTGAGGTAAGGAGCCCCATTGAGGAGCTGCATGAGCTTTGCAGGCCTTTCTTCTCCAAAGCTCAGCCTCTGTCGTTGCAAGCCTCTTCCCCCTTGTCCTCACTCTCTTCTTATTCCTCTGCGCCTCCCAAAACGCTTTCACCTCAAGAGAAGCAACAACAGCAGCGGAACAAGCAGCCACACTCTGTCACCACCCCACGATCTAAAAGAAGGAAGAACCAGCTTAAGAAAGTTTGTCAAGTGCCGTTTGAAAATCTCTCCTCAGACATATGGGCATGGAGAAAATATGGCCAGAAACCCATAAAGGGGTCTCCTTATCCAAGGGGGTACTACAGATGTAGCAGCTCAAAGGGGTGTTTGGCAAGGAAACAGGTTGAGAGGAACAGATCAGACCCAACAATGTTCATAGTGACTTACACAGCTGAGCACAACCATCCTGCTCCTACTCACAGAAACTCTCTTGCTGGCTCCACACGCCAGAAGCCATTGGCACCCCAGACTGCCACCACTGAACAAGACTCTGACAAGAGCAAAAGCCTAACAAAACCCTCTTCCCCTGCCACCTCAGGGACAGAGGAAGAGGTTCCAGCACAAGGGGAAAAGTCTGAGAGCAGAGAAGAGAAAGATGATGTGATGGATGATGAGGAAGAAGATGAATTTGTTTTGTCAGACATGGTGCTAACAGATGATTTCTTTGAGAGCTTGGATGAGCTGAGTCAACTCACTGCCCCTTCTGTTGTCACAGGAGACTGCTTCAGTGACCCCTTTTCAGCTATTGCAATCCCTTCTTGGGTGGCTAGTGGTGCTGCTACTGCTGGTGGATGCATCTGA 1041 0.4966 MAEDWDLHAVVRGCSTITSSSVSSSSSSSSGFASCYFHPEGVSSSSSSSSGFSIFRGEQGSQLLSLSAYPFEVRSPIEELHELCRPFFSKAQPLSLQASSPLSSLSSYSSAPPKTLSPQEKQQQQRNKQPHSVTTPRSKRRKNQLKKVCQVPFENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLAPQTATTEQDSDKSKSLTKPSSPATSGTEEEVPAQGEKSESREEKDDVMDDEEEDEFVLSDMVLTDDFFESLDELSQLTAPSVVTGDCFSDPFSAIAIPSWVASGAATAGGCI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0593 346 Gene3D WRKY domain 141 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0593 346 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 336 IPR044810 GO:0003700
Pvu8g0593 346 MobiDBLite consensus disorder prediction 215 262 - -
Pvu8g0593 346 MobiDBLite consensus disorder prediction 104 132 - -
Pvu8g0593 346 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 336 - -
Pvu8g0593 346 Pfam WRKY DNA -binding domain 159 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0593 346 MobiDBLite consensus disorder prediction 104 146 - -
Pvu8g0593 346 SUPERFAMILY WRKY DNA-binding domain 155 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0593 346 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0593 346 MobiDBLite consensus disorder prediction 212 288 - -
Pvu8g0593 346 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0593 Pvu-Chr8 5181941 5183860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0593 1 346 WRKY Transcription Factor Family AT4G01250 47.324 3.09e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g0593 WRKY 3.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0593 K13425 - gmx:100798084 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0593 8 5181941 5183860 Pvu4g1125 4 34620507 34622280 ECH
Pvu8g0593 8 5181941 5183860 Pvu7g0770 7 6907213 6908842 ECH
Pvu8g0593 8 5181941 5183860 Pvu8g0593 8 5181941 5183860 ECH
Pvu10g1086 10 36231937 36233733 Pvu8g0593 8 5181941 5183860 ECH
Pvu2g1648 2 30201373 30202358 Pvu8g0593 8 5181941 5183860 ECH
Pvu10g1512 10 41665877 41671047 Pvu8g0593 8 5181941 5183860 ECH
Pvu8g0593 8 5181941 5183860 Pvu10g1086 10 36231937 36233733 PCT