Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0590 ATGGAAGGCCATGACCCACCACCCCAAAGCAACCCTTTTCTCTTCACGCCTAACCCTTTGGAACCTCCAGAGCAAGGGCTACGTGACTCTGAGTGGGGTAACCTTTTCTCTGCCCAAAACAGCTTCTTGTTGGAAAGTGTTGAATGTGGTGCTTCTTCCTCTTCACCTTTTATGGCTCAAAATAAGGTAGTTTGCGAGGAGGAAAAGGGAAACCAGGAGAAAAGGAAAGGTGGGAGGGTGAAGAAAGCAACACGAGTGCCCAGGTTTGCTTTTCAAACGAGAAGTGCAGATGATATTTTGGATGATGGTTATCGTTGGAGGAAATATGGACAGAAAGCTGTGAAGAACAGCACATATCCCAG 362 0.4696 MEGHDPPPQSNPFLFTPNPLEPPEQGLRDSEWGNLFSAQNSFLLESVECGASSSSPFMAQNKVVCEEEKGNQEKRKGGRVKKATRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNSTYP 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0590 120 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 54 120 - -
Pvu8g0590 120 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 54 120 IPR044810 GO:0003700
Pvu8g0590 120 Pfam WRKY DNA -binding domain 101 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0590 120 SUPERFAMILY WRKY DNA-binding domain 93 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0590 120 MobiDBLite consensus disorder prediction 1 28 - -
Pvu8g0590 120 ProSiteProfiles WRKY domain profile. 95 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0590 120 Gene3D WRKY domain 87 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0590 Pvu-Chr8 5162766 5163155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0590 73 120 WRKY Transcription Factor Family AT5G41570 62.500 2.06e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g0590 WRKY 1.8e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0590 - - pvu:PHAVU_008G0580000 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0590 8 5162766 5163155 Pvu10g1091 10 36413066 36414301 PCT