Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0577 ATGTTCATGGAGTTTCATCTTTACCTTTACATTCTCTACACAATCCTGTTCTTACATATGTTTCCAGAATCAGCTAACTGTCAACAAGCATACCTCAACAGCACTGTCTATGACTGCTCTGAGAACCCTTCTGCATCAAAAGGATACCTGTGCAATGGCCTTCAAAAGTCATGCACTTCCTTCTTAGTTTTCAGGTCCAAATCTCCCTATGACAACCCTGTAAGCATTGCCTACCTTCTTGGCTCTGAAGCATCTACCATAGCCTCAATCAACAACATCTCAAGAGATGACAAGATTCCTTCCAATAAGTCAATCATTGTTCCTGTATTCTGTTCATGTTCTGGAAATATCTACCAGCATAACACACCTTACACTGTCACCAAGAATGACACCTACTTCAAGTTGGTTACAGAAACTTACCAAGGCCTCACCACCTGCCAGGCACTGATGGGTCAGAATTACTATGCCTCTGCTGACATTAGCGTTGGTGCTGAGCTCACAGTTCCAGTAGTATGTGCTTGTCCCACTGAAAATCAGACAGCAAGAGGGGTCACTTCCTTGCTGGTTTATTCAGTGAATAATGGTGATACTATTAAGTCCATTGGAGAGGCTTATGGTGTTGACGAACAAAGTATGCTAGAGGCCAATGGGTTGTCAGTGTCGTCAAGTGCAGAGAACATCATCATCATCTATGCCACAACTCCTATCTTGGTTCCTCTCAGAGGGAAGAGTTGCAAAGAAGACCCGGATAGTTTCTATTGTACTTGCTCCCAGGGAAGGGTTGAGGATGGAACCTTCATGGGGTTCCAATGTAATGAATCTGATGATAAAACTTTTCCTACCAAATTGGTTGCTTCTTTAGGTGTTGGAATTGGAGCAGGCTTTGTGTGTTTGTTTCTTTTGGGGTACAAATCATATCAATATATTCAGAAAAGGAGAGAAAGTATTCGTAAGGAAAGCTTATTCAGGCGAAATGGTGGATACTTGTTACAAGAGAAGCTCTCTTTTTATGGAAATGGAGAAATGGCAAAGCTGTTTAAAGCTGAGGAGCTACAGAAAGCAACAGATAACTATAACAAGAGTAGATTTCTTGGTCAGGGTGGCTTTGGCACTGTGTATAAAGGAATGCTACCAGATGGGACCATTGTTGCAGTTAAAAAGTCAAAAGAGATTGAAAGGAACCAGATTGAGACTTTTGTGAATGAAGTGGTGATTCTATCCCAGATCAACCACAGGAACATTGTCAAACTCTTTGGTTGTTGTCTTGAGACAGAAACTCCTTTACTAGTCTATGAATTCATTTCCAATGGAACACTCTCTCACCATATCCACAGGAGAGACAATGAGCCCTCCCTTTCATGGGAGACTCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTTACATATATGCATTTTTCAGCTTCTATTCCCATTTTCCATAGAGACATCAAACCTACCAACATACTTTTAGACACCAACTTCAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGACAAGACTCACTTGACCACAGCTGTAGGAGGGACTTTTGGGTACATAGACCCTGAATATTTTCAATCTAGTCAGTTTTCAGATAAAAGTGATGTGTATAGTTTTGGAGTTGTGCTAGTAGAGCTCATAAGTGGGAGAAAGCCAGTTTCATTCTTAGAGGAAGATGAGGGTCAGAATCTGATTGCAGAGTTTCTTTCTCTGATGAAGGAGAACAAAGTTTATGAAATTTTAGATGGCAGGGTGGTTAAGGAAGCAAGGAAAGATGAGATTCTTGCCATTGCAAACCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCAGTGGAATTAGAAGCATTGAGAAAGGTGCAAAGTTCCTTAGAGATCAACCATGATCATGAGTACACAACAAGTGACACAGTTCACGAATTCACAGATAAAAGCATGCCACTGTGCTTAGAACTAGACTCCACCACATCATTTTAG 2019 0.4121 MFMEFHLYLYILYTILFLHMFPESANCQQAYLNSTVYDCSENPSASKGYLCNGLQKSCTSFLVFRSKSPYDNPVSIAYLLGSEASTIASINNISRDDKIPSNKSIIVPVFCSCSGNIYQHNTPYTVTKNDTYFKLVTETYQGLTTCQALMGQNYYASADISVGAELTVPVVCACPTENQTARGVTSLLVYSVNNGDTIKSIGEAYGVDEQSMLEANGLSVSSSAENIIIIYATTPILVPLRGKSCKEDPDSFYCTCSQGRVEDGTFMGFQCNESDDKTFPTKLVASLGVGIGAGFVCLFLLGYKSYQYIQKRRESIRKESLFRRNGGYLLQEKLSFYGNGEMAKLFKAEELQKATDNYNKSRFLGQGGFGTVYKGMLPDGTIVAVKKSKEIERNQIETFVNEVVILSQINHRNIVKLFGCCLETETPLLVYEFISNGTLSHHIHRRDNEPSLSWETRLRIACEVAGAVTYMHFSASIPIFHRDIKPTNILLDTNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVELISGRKPVSFLEEDEGQNLIAEFLSLMKENKVYEILDGRVVKEARKDEILAIANLAMRCLRLNGKKRPTMKEVSVELEALRKVQSSLEINHDHEYTTSDTVHEFTDKSMPLCLELDSTTSF* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0577 672 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 655 IPR045274 GO:0007166
Pvu8g0577 672 SUPERFAMILY Protein kinase-like (PK-like) 342 628 IPR011009 -
Pvu8g0577 672 SMART serkin_6 358 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0577 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Pvu8g0577 672 Gene3D Transferase(Phosphotransferase) domain 1 434 656 - -
Pvu8g0577 672 PANTHER LYSM TYPE RECEPTOR KINASE 27 655 - -
Pvu8g0577 672 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
Pvu8g0577 672 Pfam LysM domain 190 221 IPR018392 -
Pvu8g0577 672 CDD STKc_IRAK 364 631 - -
Pvu8g0577 672 Gene3D Phosphorylase Kinase; domain 1 330 433 - -
Pvu8g0577 672 ProSiteProfiles Protein kinase domain profile. 358 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0577 672 SMART LysM_2 123 169 IPR018392 -
Pvu8g0577 672 SMART LysM_2 189 239 IPR018392 -
Pvu8g0577 672 SMART LysM_2 69 108 IPR018392 -
Pvu8g0577 672 Pfam Protein kinase domain 358 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0577 Pvu-Chr8 5065302 5067625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0577 288 632 Receptor kinase-like Gene Family AT1G16130 59.078 1.04e-142 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pvu8g0577 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0577 - - vun:114186184 1228