Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0551 ATGGGGTTGATTCTGGAGGTCGAGAACGGCGACGACGACAACGACGCCGTTCTGGTTCCGCCCCCTAACTTCGCCATGGTCGAGGACTGCATTTTCCGATCCAGCTTCCCCACCTCCTCCAATTTTCCCTTTCTCCAAACCCTAAACCTTCGCTCCATCATATACCTGTGCCCTGAGCCTTATCCTGAGGAGAATCTAGAGTTCCTTCGCTCGCAGAATATTCGGCTCTTTCAATTTGCAATTGAGGGGAAAACGGATGTTTCTACCCCTATTCTCAAGGATTCTGTCATGGATGCACTCAAAGTTTTAATTGACGTGAGAAATCACCCTGTTTTGATCCATTGCAAGCGAGGAAAGCATAGAACCGGTTGCCTTGTTGGTTGCTTGCGAAAATTACAGAATTGGTGTTTGTCTTCTGTATTTGAGGAGTATCAACGATTTGCTGGTGTTAAATCCAGGACAATGGATTTAACATTTATAGAAATGTTTGACATTCTAAGCCTGAGCCAGTGCCTTTACAGCATAATATACCAGTACCATGGATATGGTTCCAAAAAGCGTCGGTTGTTGTACAAAGATGAGAATTTACAGAAGCCCCGATTGACATCATTTTAG 615 0.4472 MGLILEVENGDDDNDAVLVPPPNFAMVEDCIFRSSFPTSSNFPFLQTLNLRSIIYLCPEPYPEENLEFLRSQNIRLFQFAIEGKTDVSTPILKDSVMDALKVLIDVRNHPVLIHCKRGKHRTGCLVGCLRKLQNWCLSSVFEEYQRFAGVKSRTMDLTFIEMFDILSLSQCLYSIIYQYHGYGSKKRRLLYKDENLQKPRLTSF* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0551 204 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 13 187 - -
Pvu8g0551 204 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 18 165 IPR029021 -
Pvu8g0551 204 Pfam Tyrosine phosphatase family 18 166 IPR004861 -
Pvu8g0551 204 ProSiteProfiles Dual specificity protein phosphatase domain profile. 23 172 IPR020422 GO:0006470|GO:0008138
Pvu8g0551 204 PANTHER TYROSINE-PROTEIN PHOSPHATASE 13 187 - -
Pvu8g0551 204 ProSitePatterns Tyrosine specific protein phosphatases active site. 113 123 IPR016130 GO:0016311|GO:0016791
Pvu8g0551 204 Gene3D Protein tyrosine phosphatase superfamily 17 167 IPR029021 -
Pvu8g0551 204 CDD PFA-DSP_Siw14 18 164 - -
Pvu8g0551 204 PRINTS Plant and fungal dual specificity phosphatase signature 18 35 IPR020428 GO:0016791
Pvu8g0551 204 PRINTS Plant and fungal dual specificity phosphatase signature 55 68 IPR020428 GO:0016791
Pvu8g0551 204 PRINTS Plant and fungal dual specificity phosphatase signature 74 88 IPR020428 GO:0016791
Pvu8g0551 204 PRINTS Plant and fungal dual specificity phosphatase signature 91 105 IPR020428 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0551 Pvu-Chr8 4851086 4853304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0551 1 200 Protein tyrosine phosphatase (PTP) family AT3G02800 70.500 1.58e-105 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0551 K18045 - gmx:100787713 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0551 8 4851086 4853304 Pvu8g0551 8 4851086 4853304 ECH