Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0549 ATGGAACATGATGATCTAAACAACAATCAGAACAAGAATTGTAATGAAGAAAGCCTTGTGTCAGAATCAAATGGTGCAAAGAGAAGCATTGCTGAGAGGAGGGGTTTCAATTCCAATGCGGCACAAATCAACACAGCACTGTTTCGCACTGCAACTTCAACAACCCCTTCTCCTTCCCCTGCTGCTCGATCACCTCGTCTCACCATTCCCCCTGGCATCAGCCCCACTGCATTGCTTGGCTCTCCCATCATGCTTCCAAATTCTCAGGCAGTGCCATCATCCCCCACCACGGGCAGTTTCTTCATGATGCCACCTCTACCTCAGGAATCTAATCCATTGCTTCCTCCCTATTCTGCCCCTCTGAATCAGGTTTCTAGTAATTTCCACTCGATAAAGGGAGGAAATAGAGAAAGCCAACCACTTGCTCAAGTTCAGTCACCATTAGATTTTTCATTCCCAGCAGATTTTTCTAAAGGCCATTCTGTGAAAAATAGTGAAGTGAATTCATACAATGATATTGAAATGGTAAATGATGCAATTGTTAATGCCAATAATGTTGAGATGCCAATGTCTGGCTCTGAAGAAGTAAGCGATGAAAGTGCTGTGCCGAAAAATGGTATCAATGGTGAGGATATTGGAGGGAGACCTGCTCCAGAAGGAGAACTGAAAGAAGCATCTCATGCAACAGGCGTGGTGAGGACCTCAGAGGATGGTTATAATTGGAGAAAATATGGACAAAAACAGGTAAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGCACACAACCTAATTGTCAGGTCAAGAAAAAGGTGGAACGATCCCATGATGGTCAAATTACAGAAATTATTTATAAGGGTAATCATAACCATGTAAAACCACACTCTACTCATAGAGGATCTGCACTTTCTACTGATGAGGTTTCAGACATGGCTGAAGAAGGTGCATTAGCTAAAGTTGATGGTGGGTTCATGTGGAGAAATGTTCAGTCAGGACTAAAAGATTCAAAAAACAGTTTAGATTGGAAGGGTGATGGTCAGGAAAGGACATCATCAACTTCTGTTGTGACTGAGATTTCAGATCCTATATCAACCAACAAAGCTAAATCTCTATCTATGTTTGAATCGGAGGAGACCCCAGAGCTTTCTTCTACACTTGCTAGTCATGACATGGAAGAAGATGGAACCACTCAAGCACTTGCGTTGGTTGAAGATGAAGCTGAGAATGATGAATCGGAACCTAAAAGAAGGAAGAAAGAGAGCTATGCAGTTGAATCAACTTTGCCCCCTAGGTCTGTTCGTGAGCCAAGAGTGGTAGTCCAAATTGAGAGTGAAGTGGACATTCTTGATGATGGTTATCGCTGGCGTAAGTATGGACAGAAGGTTGTCAAAGGAAATCCGAATCCTAGGAGCTACTATAAATGCACAAGTGCCGGATGTACGGTAAGGAAACATGTGGAAAGGGCCTCACACAATCTAAAATTTGTGCTTACAACTTATGAGGGAAAGCACAATCATGAAGTGCCCACAGCAAGAACCAACAATCAGATAAACACAAGTGATGGTGGTTTGCCCCCCAATGGTGTCAATGGGCAAGTGGCTCTTGCTTTACCAGGGAATGCTGGCATTAAGGCTGAGACTCATCAAACTCTTGCACATCATTTTGATAGAAAACCTGAATTCAGCAATGAGTTTCTCAGGCCTAGTTTGATTGGAAGTTTCAACAATGACATGAAGTTTGGTCCTTCTTCCCTTTGTCAAATGAAGTATCCTTCCTTGAATAACACCATGCCTTATGGCTATGCAATGAACCCTGATCGTTGTGCTGCCCCTCAAGCTGGATCCATTGCCTCAATGTTCCCTGATTTTCCAATGCCACTACCATTGAATCTTCCCTCATCTGGAAAATTTTCAATTTCTGGACTTAACTTTAACTGTGCCAAACCAATAAATCCTATCCAATCTTTTCTTTCTGGGCAGCAAGTGAAGGACATTGATACAGTATTTCTGAGGCCTAAGCAGGAACAGAAGGATGATACTATATATGGTTCGTGCATTCCCTCACTAGATGCAAATGCTTCACTCACTTCTTCTTCAGCAGCACCATCCATTTATCAACGAGTCATGCAAAATTTCCCTTCATAA 2145 0.4242 MEHDDLNNNQNKNCNEESLVSESNGAKRSIAERRGFNSNAAQINTALFRTATSTTPSPSPAARSPRLTIPPGISPTALLGSPIMLPNSQAVPSSPTTGSFFMMPPLPQESNPLLPPYSAPLNQVSSNFHSIKGGNRESQPLAQVQSPLDFSFPADFSKGHSVKNSEVNSYNDIEMVNDAIVNANNVEMPMSGSEEVSDESAVPKNGINGEDIGGRPAPEGELKEASHATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGNHNHVKPHSTHRGSALSTDEVSDMAEEGALAKVDGGFMWRNVQSGLKDSKNSLDWKGDGQERTSSTSVVTEISDPISTNKAKSLSMFESEETPELSSTLASHDMEEDGTTQALALVEDEAENDESEPKRRKKESYAVESTLPPRSVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKFVLTTYEGKHNHEVPTARTNNQINTSDGGLPPNGVNGQVALALPGNAGIKAETHQTLAHHFDRKPEFSNEFLRPSLIGSFNNDMKFGPSSLCQMKYPSLNNTMPYGYAMNPDRCAAPQAGSIASMFPDFPMPLPLNLPSSGKFSISGLNFNCAKPINPIQSFLSGQQVKDIDTVFLRPKQEQKDDTIYGSCIPSLDANASLTSSSAAPSIYQRVMQNFPS* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0549 714 Pfam WRKY DNA -binding domain 236 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0549 714 Pfam WRKY DNA -binding domain 450 507 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0549 714 ProSiteProfiles WRKY domain profile. 230 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0549 714 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 689 IPR044810 GO:0003700
Pvu8g0549 714 MobiDBLite consensus disorder prediction 1 28 - -
Pvu8g0549 714 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 9 689 - -
Pvu8g0549 714 ProSiteProfiles WRKY domain profile. 444 509 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0549 714 MobiDBLite consensus disorder prediction 335 432 - -
Pvu8g0549 714 Gene3D WRKY domain 223 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0549 714 SUPERFAMILY WRKY DNA-binding domain 442 509 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0549 714 MobiDBLite consensus disorder prediction 11 25 - -
Pvu8g0549 714 MobiDBLite consensus disorder prediction 345 392 - -
Pvu8g0549 714 MobiDBLite consensus disorder prediction 409 424 - -
Pvu8g0549 714 Gene3D WRKY domain 436 502 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0549 714 MobiDBLite consensus disorder prediction 196 229 - -
Pvu8g0549 714 SUPERFAMILY WRKY DNA-binding domain 233 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0549 714 SMART WRKY_cls 449 508 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0549 714 SMART WRKY_cls 235 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0549 Pvu-Chr8 4839408 4843253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0549 4 512 WRKY Transcription Factor Family AT5G56270 40.490 8.56e-96 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g0549 WRKY 4.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0549 K18835 - gmx:100800211 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0549 8 4839408 4843253 Pvu8g0549 8 4839408 4843253 ECH