Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0544 ATGGTTATGGAAAATCCAAACTTGCTATCTCTCTTCATCATCCTCCTATTGGGTCATTGGATCCATGTTCAAGCTGCTCCTCCTCACTCTCTCGTCACACAACTCCCTGGCTTCAACTCCAATTTCCCATCCAAACACTATTCAGGGTATATAAGTATTGATGGAAATGATGAGAATGGGAAGAGGCTGTTCTACTACTTGGTGAGTTCAGAGAGAAGTGCAGAGAAGGACCCCGTGGTGCTATGGCTGAATGGTGGACCTGGGTGTTCCAGCTTCGATGGCTTCGTTTATGAGCATGGACCATTCAACTTTGAGGCTGCAAAATCAAAAGGGAATCCACCCACTTTGCATATCAACCCTTACAGCTGGTCCAAGGTTTCAAACATCATATATTTTGATTCTCCTGCTGGGGTTGGACTCTCTTATTCCAAGAACACAAGCAAATATGTTACTGGGGACCTGAAAACTGCTTCTGATACCCATGCTTTCCTCTTAAAGTGGTTTCAGCAATTTCCAGAATTCCAGGCTAATCCATTTTATATTGCTGGAGAGTCTTACGCTGGAATTTATGTGCCTACTCTGGCTTCTGAAGTTGCTAAAGGAATCCAAAGTGGTACAAAGCCCGTGATCAATTTTAAGGGTTACATGGTTGGAAATGGTGTCACGGACGAAATATTTGATGGCAATGCTCTCATCCCATTTGTGCATGGGATGGGCCTCATATCCGACAGTATCTATGAGGATCTGCAAGCTACTTGCAAAGGAAACTACTACGATGCTTACTCCTTGGATGAAAATGATGGGTGTTATAAGAGCATGGAAAAAGTTGACAGGGCCATTGATGGGCTTAACGTGTACAATATACTAGAGCCATGCTACCATTTCCCTGATACTGCAACAGCCAAACAAAATGGAAGCTTACCAATGAGTTTCAAGCAATTAGGAGTTACTGAGAAGCCTCTCCCAGTGAGGAAGAGAATGTTTGGAAGAGCTTGGCCTTTTCGAGCACCAGTCAAAGCTGGTCTTGTCACATTATGGCCTCAGTTGGCTGAAACGAGGCACGTGGCTTGTGTTAATGATGAAGTAGCAAGCTCATGGCTGAACAACGAGGCAGTGAGGAAAGCCATTCATGCTGAATCGGAAAATGTGGCGGGTGCATGGGAATTATGTACAAGTAGGATACAGTACCATCACGATGCTGGAAGCATGATTCCTTACCACAGGAACCTAACCAAGCAGGGCTACAAGGCACTTATTTTCAGTGGTGACCATGATATGTGTGTACCATTTACTGGAAGTGAGGCTTGGACTCGAGCTCTGGGATATAAGATTGTGGATGAATGGAGGCCATGGAACTCAAATGACCAAGTTGCTGGGTACCTGCAAGCTTACGAGAACAACCTGACATTCCTAACAATCAAGGGAGCTGGGCACACCGTGCCGGAATATAAGCCACGGGAAGCGTTGGATTTTCTCAGCCATTGGTTGGAAGGAAAGAAAATATAA 1506 0.4489 MVMENPNLLSLFIILLLGHWIHVQAAPPHSLVTQLPGFNSNFPSKHYSGYISIDGNDENGKRLFYYLVSSERSAEKDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKSKGNPPTLHINPYSWSKVSNIIYFDSPAGVGLSYSKNTSKYVTGDLKTASDTHAFLLKWFQQFPEFQANPFYIAGESYAGIYVPTLASEVAKGIQSGTKPVINFKGYMVGNGVTDEIFDGNALIPFVHGMGLISDSIYEDLQATCKGNYYDAYSLDENDGCYKSMEKVDRAIDGLNVYNILEPCYHFPDTATAKQNGSLPMSFKQLGVTEKPLPVRKRMFGRAWPFRAPVKAGLVTLWPQLAETRHVACVNDEVASSWLNNEAVRKAIHAESENVAGAWELCTSRIQYHHDAGSMIPYHRNLTKQGYKALIFSGDHDMCVPFTGSEAWTRALGYKIVDEWRPWNSNDQVAGYLQAYENNLTFLTIKGAGHTVPEYKPREALDFLSHWLEGKKI* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0544 501 Gene3D - 354 501 - -
Pvu8g0544 501 SUPERFAMILY alpha/beta-Hydrolases 32 499 IPR029058 -
Pvu8g0544 501 Gene3D alpha/beta hydrolase 25 324 IPR029058 -
Pvu8g0544 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Pvu8g0544 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Pvu8g0544 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Pvu8g0544 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 468 481 IPR001563 GO:0004185|GO:0006508
Pvu8g0544 501 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Pvu8g0544 501 ProSitePatterns Serine carboxypeptidases, histidine active site. 468 485 IPR033124 GO:0004185
Pvu8g0544 501 PANTHER CARBOXYPEPTIDASE 17 500 - -
Pvu8g0544 501 Pfam Serine carboxypeptidase 36 498 IPR001563 GO:0004185|GO:0006508
Pvu8g0544 501 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 500 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0544 Pvu-Chr8 4762888 4768384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0544 362 501 Calmodulin-binding Proteins AT2G22960 47.857 1.27e-41 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0544 8 4762888 4768384 Pvu8g0544 8 4762888 4768384 ECH
Pvu8g0544 8 4762888 4768384 Pvu10g1098 10 36446601 36448886 PCT