Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0540 ATGTGTGGGATTTTCGCGTATCTGAATTTCAACGTGAACAGAGAGCGAAGGTATATCTTGCAAGTTCTCTTCAATGGCTTGCGCAGATTGGAGTATCGTGGATACGATTCAGCCGGCATCGCCATCGATTCCTCTTCGCAATGCGCTTCCGATGCCGAATTCCCTCTCCCTCATCCTCCTCACGTTTTCCGCCAAGAAGGAAACATCGAATCGCTCGTCAAATCTGTGTACCAAGAGGTGGGAGAAATCAAATTGAATTTGGAGGAGCCCTTCAGCACGCACGCCGGAATCGCGCACACTCGGTGGGCCACTCACGGAGAGCCTGCTCCGCGGAACAGTCATCCTCAGACCTCTGGTCCGGAGAACGAGTTCTTGGTTGTTCACAATGGAGTTATCACTAACTATGAGGTTTTGAAGGAGACGCTGCTGCGGCATGGCTTCACGTTTGAGTCGGAGACTGACACTGAGGTCATTCCCAAGCTTGCGAAGTTTGTTTACGACAAGGCCAACGAAGCTGCGGATGGTGTTACCTTCAGTCAAGTTGTTTTGGAAGTTATGAGGCATCTTGAAGGAGCTTATGCCCTTATTTTCAAAAGTCCACATTATCCTAATGAATTGATTGCTTGCAAGCGTGGTAGCCCACTGCTCCTAGGTGTTAAAGAATTGACAGAAAATAAAGGCAATGGTTCAGCATTTGAGGATGACAAATTCCTATCAAAAGATGACAAACCCAAAGAATTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAACATACAAAGAAAGTGCTAGTTATTGAGGATGGTGAAGTAGTTCATCTCAAGGATGGCGGGGCTTCTATTTTGAAGTTTGACAGTAACATGGGAGAAAATGGGGCTTTTCTTTCTAGAACTTGTTCAGTGAGACGTGCATTATCTGTTCTTGAGATGGAGGTCGAGCAAATAAATAAAGGTCATTATGAGCATTATATGCAGAAGGAAATTTATGAGCAACCGGAATCTCTAACAACCACAATGAGGGGGAGGCTTATACGTCTTGGAGCTAACAAATCCAAGTCTGTTCTGTTGGGTGGGCTGAAGGATCATCTCAAAACAATTAGGCGAAGTAGAAGGATAGTTTTCATTGGTTGTGGTACAAGTTATAATGCTGCTTTGGCAGCTAGACCCATCTTGGAAGAACTTTCTGGTGTTCCTGTTACTATGGAAATTGCTAGTGATCTATTGGACCGGGAGGGACCAATATACAGGGAAGATACTGCTGTTTTTGTAAGTCAGTCTGGCGAAACAGCTGACACTTTACTGGCACTGGAGTATGCTTTAGAGAATGGTGCTTTGTGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACTCATTGTGGTGTTCACATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATACACAAGTCAAATAGTGGTGATGGTCATGTTATCTCTTGCAATAGGAGGTGATACAATTTCAAATAAAGCCAGAAGAGAAGCTATCATAGATGGTCTTTTTAACCTGCCAAATAAAGTGAGAGAGGTGCTGAAACTTGACCAGGAGATGAAGGATCTAGCAAAGCTGTTGATTGCTGAGCAGTCTCTTCTTGTCTTCGGAAGAGGATACAACTATGCAACTGCTCTTGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTTATGCATAGCGAAGGGATACTTGCTGGTGAAATGAAGCATGGTCCTTTGGCATTAGTTGATGAAAATCTCCCAATTGTTGTTGTAGCTACTCGTGATGCTTGCTTCAGCAAACAGCAGTCTGTTATCCAGCAACTTCATGCCCGCAGAGGTCGTCTGATTGTTATGTGTTCTAAAGGGGATGCTTCCTCTGTTTGCCCTAATCAATCTTGTAGGGTAATTGAAGTTCCTCAAGTTGAAGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGTTATTGGCATATCACCTCACTGTTCTCAGGGGATTTAATGTGGACCAGCCTCGTAATCTTGCCAAGAGCGTCACAACGCAATGA 2061 0.4425 MCGIFAYLNFNVNRERRYILQVLFNGLRRLEYRGYDSAGIAIDSSSQCASDAEFPLPHPPHVFRQEGNIESLVKSVYQEVGEIKLNLEEPFSTHAGIAHTRWATHGEPAPRNSHPQTSGPENEFLVVHNGVITNYEVLKETLLRHGFTFESETDTEVIPKLAKFVYDKANEAADGVTFSQVVLEVMRHLEGAYALIFKSPHYPNELIACKRGSPLLLGVKELTENKGNGSAFEDDKFLSKDDKPKELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGASILKFDSNMGENGAFLSRTCSVRRALSVLEMEVEQINKGHYEHYMQKEIYEQPESLTTTMRGRLIRLGANKSKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGVPVTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALEYALENGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMVMLSLAIGGDTISNKARREAIIDGLFNLPNKVREVLKLDQEMKDLAKLLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVVATRDACFSKQQSVIQQLHARRGRLIVMCSKGDASSVCPNQSCRVIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0540 686 CDD SIS_GlmS_GlmD_2 528 684 IPR035490 -
Pvu8g0540 686 Gene3D - 522 671 - -
Pvu8g0540 686 Gene3D - 318 685 - -
Pvu8g0540 686 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 297 IPR029055 -
Pvu8g0540 686 CDD SIS_GlmS_GlmD_1 371 496 IPR035466 -
Pvu8g0540 686 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 686 - -
Pvu8g0540 686 ProSiteProfiles SIS domain profile. 533 676 IPR001347 GO:0097367|GO:1901135
Pvu8g0540 686 Pfam SIS domain 537 668 IPR001347 GO:0097367|GO:1901135
Pvu8g0540 686 Pfam SIS domain 366 491 IPR001347 GO:0097367|GO:1901135
Pvu8g0540 686 ProSiteProfiles SIS domain profile. 362 501 IPR001347 GO:0097367|GO:1901135
Pvu8g0540 686 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 277 IPR017932 -
Pvu8g0540 686 SUPERFAMILY SIS domain 317 685 IPR046348 GO:0097367|GO:1901135
Pvu8g0540 686 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 283 IPR029055 -
Pvu8g0540 686 CDD GFAT 2 274 - -
Pvu8g0540 686 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 686 - -
Pvu8g0540 686 Pfam Glutamine amidotransferase domain 92 197 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0540 97 218 PRT Gene Family AT2G16570 28.571 1.68e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0540 K00820 - gmx:100792835 1219.14