Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0528 ATGGGGTCTATGAACTTGTTGGGGTTTTCTCTCTCCCCTCAAGAACACCCTTCTAGTCAAGATCACCCTCAACCGGCACCTTCTCGTTTTGGTTTCAACCCTGATGGAATCTCAAGCACTGATGTTGCAGGAGACTGTTTTGATCTCACTTCTGACTCAAGTCCTCATTTGCTCAACCTTCCTTCTTATGGCATATATGAAGCATTTCACAGAAACAACAGCATTCACACCACTCAAGATTGGAAGGAGAACTACAGCAGTCAAAACTTGCTACTGGGAACCTCATGCAGTAACCAAAACATGAACAACAATCAACATCAACAACAACAGCCAAAGCTTGAAAACTTTCTGGGTGGACATTCATTTGGAGAACATGACCAAACCTACGGTGGTAACTCATCCTCAACAGATTACATGTTTCCGACTCAGCCAGTAGCAACCAGTGGGGGCAGTACTACAAGCAATAATAGTATAGGGTTATCCATGATAAAGACATGGTTGAGGAACCAACCACCTCACTCAGAAAAAAACAATGAAAGTGCTGGGAACAGTGGTAGTGTGCAGACTCTATCACTTTCTATGAGTACTGGTTCACAATCTAGCACATCACTTCCCGTTCTCTCTGCAAGTGTGGAAAATGGAGAGAGTTCTTCAGATAACAAACAACCACCAACCACTGCTGCACTTGATACCACCCCAACAGGAGCCACTGAATCTGCACCCAGAAAGTCCATCGACACTTTTGGACAAAGAACTTCTATATACCGTGGTGTAACAAGGCATAGGTGGACTGGGAGGTACGAGGCTCATCTGTGGGATAACAGCTGTAGAAGAGAGGGACAAACTCGCAAAGGAAGACAAGGAGGTTATGACAAAGAAGAAAAGGCAGCTAGAGCCTATGATTTGGCAGCACTAAAATACTGGGGAACAACTACAACAACAAATTTTCCTATTAGCCACTATGAGAAAGAGGTGGAAGAGATGAAGCACATGACCAGACAAGAGTACGTTGCTTCTTTGAGAAGGAAGAGTAGTGGGTTCTCTCGCGGTGCATCCATTTATCGAGGAGTAACAAGACACCATCAACATGGTAGATGGCAAGCAAGGATTGGGAGAGTTGCAGGCAACAAGGATCTCTACTTGGGAACATTCAGCACTCAAGAAGAAGCAGCAGAGGCTTATGATGTTGCGGCCATCAAATTCCGCGGACTTAGTGCTGTTACAAACTTTGACATGAGCAGATATGATGTGAAGAGCATACTTGAGAGCACTACTTTGCCCATTGGTGGTGCTGCCAAGCGTTTGAAGGATATGGAACATGTGGAACTGAACGTGGAAGCTCGTAGAACAGACCAAGAAGATCATAGCAGCAACATCTTGAACAACTCTCACCTAACTCAGGGAATCAGTAATAACTATGCAGGAGGAACAACTCATCATCATAACTGGCACAACACTCTTTCATTTCACCAACCTCAACCTCAAGCTTGCACCACCATGCACTACCCTTATGGACAGAGACTATGGTGCAAGCAAGAACAACAAGACAATTCTGATACCTCTCACCCTTTGTCTTATCCTGATATTCATCAACTACAGCTAGGGAATAATGGCACGCACAACTTTTTTCACACAAGTTCCGCGTTGCACCCTATCATGAACATGGATTCTGGTTCCATTGACAACAGCTCTTCATCTAACTCGGTAGTTTATGATGGTTATGGAGGAGGTGGGGGCTATGTGATGCCTATGGGTGCTACTACTGTCGTTGCAAGTGATGGTGATCATAATCAAAGAGGCCATCATGGTTTTGGTGACAATGAGATGAAGGCACTTGGTTATGAAAGTGTTTATGGATCTAATGATGCTTATCATGCACATGCAAGGAACTTGTATTATCTTTCCCAACACCAATCATCTTCTGTGGATGCAGTGAAGGCTAGTGCATATGATCAAGGAGGTTCTGCATGCAACACTTGGGTTCCAACTGCTATTCCAACGCTTGCACCAAGGTCTACCAGTATGTCTCTATGCCATGCTGCTCCACCCTTCTCGTTATTGCATGAATAG 2070 0.4449 MGSMNLLGFSLSPQEHPSSQDHPQPAPSRFGFNPDGISSTDVAGDCFDLTSDSSPHLLNLPSYGIYEAFHRNNSIHTTQDWKENYSSQNLLLGTSCSNQNMNNNQHQQQQPKLENFLGGHSFGEHDQTYGGNSSSTDYMFPTQPVATSGGSTTSNNSIGLSMIKTWLRNQPPHSEKNNESAGNSGSVQTLSLSMSTGSQSSTSLPVLSASVENGESSSDNKQPPTTAALDTTPTGATESAPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKSILESTTLPIGGAAKRLKDMEHVELNVEARRTDQEDHSSNILNNSHLTQGISNNYAGGTTHHHNWHNTLSFHQPQPQACTTMHYPYGQRLWCKQEQQDNSDTSHPLSYPDIHQLQLGNNGTHNFFHTSSALHPIMNMDSGSIDNSSSSNSVVYDGYGGGGGYVMPMGATTVVASDGDHNQRGHHGFGDNEMKALGYESVYGSNDAYHAHARNLYYLSQHQSSSVDAVKASAYDQGGSACNTWVPTAIPTLAPRSTSMSLCHAAPPFSLLHE* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0528 689 MobiDBLite consensus disorder prediction 1 35 - -
Pvu8g0528 689 CDD AP2 352 413 IPR001471 GO:0003700|GO:0006355
Pvu8g0528 689 ProSiteProfiles AP2/ERF domain profile. 353 411 IPR001471 GO:0003700|GO:0006355
Pvu8g0528 689 Pfam AP2 domain 254 309 IPR001471 GO:0003700|GO:0006355
Pvu8g0528 689 Pfam AP2 domain 353 403 IPR001471 GO:0003700|GO:0006355
Pvu8g0528 689 PANTHER BNAC02G44180D PROTEIN 5 605 - -
Pvu8g0528 689 Gene3D AP2/ERF domain 353 413 IPR036955 GO:0003700|GO:0006355
Pvu8g0528 689 Gene3D AP2/ERF domain 254 319 IPR036955 GO:0003700|GO:0006355
Pvu8g0528 689 CDD AP2 253 319 IPR001471 GO:0003700|GO:0006355
Pvu8g0528 689 MobiDBLite consensus disorder prediction 169 248 - -
Pvu8g0528 689 ProSiteProfiles AP2/ERF domain profile. 254 317 IPR001471 GO:0003700|GO:0006355
Pvu8g0528 689 SUPERFAMILY DNA-binding domain 253 319 IPR016177 GO:0003677
Pvu8g0528 689 SMART rav1_2 353 417 IPR001471 GO:0003700|GO:0006355
Pvu8g0528 689 SMART rav1_2 254 323 IPR001471 GO:0003700|GO:0006355
Pvu8g0528 689 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 605 - -
Pvu8g0528 689 SUPERFAMILY DNA-binding domain 352 413 IPR016177 GO:0003677
Pvu8g0528 689 MobiDBLite consensus disorder prediction 1 26 - -
Pvu8g0528 689 PRINTS Ethylene responsive element binding protein signature 255 266 IPR001471 GO:0003700|GO:0006355
Pvu8g0528 689 PRINTS Ethylene responsive element binding protein signature 393 413 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0528 Pvu-Chr8 4601738 4606123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0528 111 602 AP2-EREBP Transcription Factor Family AT5G17430 49.705 9.66e-136 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pvu8g0528 AP2 3.7e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0528 K09285 - gmx:100797584 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0528 8 4601738 4606123 Pvu8g0528 8 4601738 4606123 ECH
Pvu10g0383 10 5397915 5400127 Pvu8g0528 8 4601738 4606123 PCT