Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0517 ATGGACAAGGCTTATGTGCTTCGTGAAGCTGTGAATTACACAAGGCAACTTCAAGAGAGAGTAAAAGAGTTGGAAAATCAAAACAATGACACAAGAGTAGTGCATCATTCATCAACATTGGTAATGAAATCTCAAGCCTCCTCAGATAAAAACAGCAGCAATATTAGTGAAAGCAACAAAGAATCACTGTTTGAGGTTGAAGCAAGAGTTCTTGATGAGGAAGTACTCATCAGAATCCATTGTGAGAAGCAAAAGGACATAATCTGCAACATACTTGTCTTGCTTGAAAAGTTCCATCTTTCTCCAACCAGTAGCAGCGTGTTACCATTTGGCACTTCTACTCTTATAATCCACATCATTGCTCAGATGGATGAGGAATGCAGAATGAGCACGGATGAGCTAGTGAAGAATCTGAGAGAATATCTTTTGGATGTGTATGGCATGCAACAGTGA 453 0.3951 MDKAYVLREAVNYTRQLQERVKELENQNNDTRVVHHSSTLVMKSQASSDKNSSNISESNKESLFEVEARVLDEEVLIRIHCEKQKDIICNILVLLEKFHLSPTSSSVLPFGTSTLIIHIIAQMDEECRMSTDELVKNLREYLLDVYGMQQ* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0517 150 Gene3D - 1 52 IPR036638 GO:0046983
Pvu8g0517 150 PANTHER BHLH TRANSCRIPTION FACTOR 1 148 - -
Pvu8g0517 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 37 IPR036638 GO:0046983
Pvu8g0517 150 MobiDBLite consensus disorder prediction 24 58 - -
Pvu8g0517 150 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 148 - -
Pvu8g0517 150 MobiDBLite consensus disorder prediction 31 58 - -
Pvu8g0517 150 Coils Coil 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0517 Pvu-Chr8 4471832 4472819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0517 2 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 40.764 1.78e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0517 - - pvu:PHAVU_008G050900g 275.789