Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0509 ATGGCCGGCATAGACTTGGGTTCAGCATCGCATTTTGTTCATCATCGCCTTCAACGCCCCGACCTTGAAGACGATGACAACCAACAAGACCAAGACAACAACGTTAACAACCACGAAGGGCTTGACCTAGTCGCCACGAATCAAGGTCCTGGTGATATTGTCGCTCGCAGGCCAAGAGGAAGACCTCCAGGTTCAAAGAACAAGCCTAAACCACCTGTTATCATCACAAGAGAGAGTGCAAACACTCTTAGGGCTCACATCCTTGAAGTCAGCAGTGGCTGTGATGTCTTTGACTCCGTCGCTACCTACGCCAGGAAGCGACAAAGAGGGATCTGTGTCCTCAGTGGGAGTGGCACCGTCACCAATGTCACGTTGCGGCAGCCGGCCGCAGCCGGCGCCGTTGTCACGCTTCACGGAAGGTTCGAGATCCTGTCCTTGTCGGGATCATTCCTTCCACCTCCTGCTCCACCAGGCGCCACCAGTTTAACTGTTTTTCTCGGTGGAGGACAGGGCCAGGTTGTCGGAGGCAACGTTGTTGGTCCTTTGGTTGCTTCTGGGCCTGTTATTGTTATCGCTTCATCTTTCACTAATGTAGCATACGAGAGATTGCCTTTGGATGAAGAAGATTCTATGCAGATGCAACAGGGACAATCATCTGCCGGAGGTGGTGGTAGCGGCGGTGGTGGTGGTGGAGTTAGTAATAACTCTTTCCCTGACCCTTCTTCAGGGCTTCCATTCTTCAATTTGCCCTTAAACATGCCTCAGTTACCTGTTGATGGTTGGGGTGGGAACTCTGGTGGAAGACAATCTTACTGA 816 0.5196 MAGIDLGSASHFVHHRLQRPDLEDDDNQQDQDNNVNNHEGLDLVATNQGPGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEEDSMQMQQGQSSAGGGGSGGGGGGVSNNSFPDPSSGLPFFNLPLNMPQLPVDGWGGNSGGRQSY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0509 271 MobiDBLite consensus disorder prediction 20 73 - -
Pvu8g0509 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Pvu8g0509 271 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Pvu8g0509 271 CDD DUF296 84 159 IPR005175 -
Pvu8g0509 271 PIRSF ESCAROLA 3 266 IPR014476 GO:0003680
Pvu8g0509 271 Gene3D - 83 217 - -
Pvu8g0509 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 271 IPR014476 GO:0003680
Pvu8g0509 271 MobiDBLite consensus disorder prediction 209 249 - -
Pvu8g0509 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 5 271 - -
Pvu8g0509 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0509 Pvu-Chr8 4386508 4387872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0509 1 268 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 64.238 8.83e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0509 - - vra:106758954 452.21