Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0501 ATGGCTTCCCCATCTTCCCCCACTGATTCCAACCCCCCCTCCGCGGTTCCTCTCCCTCTCCCCGCCCCTCCCTCCACCTCCTCCCGCCGCCTCCCCCCGCCCTGCTGGACCCCGGAGGAAACCGCCGCCCTCATCGACGCCTACCGCGACAAGTGGTACTCCCTCGGCCGCACCAACCTCAAAGCCACCCACTGGCAAGAGGTCGCCGACGCCGTCACCGCCCAGTGCCCCAACGCTTCCCCCACTGCCAAAACTGCCGTCCAGTGCCGCCACAAAATGGAAAAACTCCGCAAACGGTACCGCACCGAAATCCAACGCCTCCGCTCCCTCCCCCTCCCTCGCCTCATCAACAACTCCACCACCGCTTCGCCCTCCTCCTGGGTCCACTTCAAATCCATGGACTCCATGGAAAAAGGCCCCAACAAACCCCACACCGACACCACCACCGCCACCAACCCCAGCACCCCCTCCAACAACCTCAACTTCCCAGACGACGACAACGACGACGATCTGTACGAGGAATTCAAGAACGCCCCCGGATCCAACACGCGCAGCCTCAACAAACTCTACAAGAACGGTTTCGGATCCGGCTCCGGCTCCGGGTTCCGGATCCGGATCCCGGCGGGGGTGCCAAACCATACCCCTTCCAAGTTCTTCAGCGCGCCCCCTCCCGGCATGGCGCCGCGCAACGGCGCGAAGAGGGAGCGCGAGAGCGACGCGGTGGCCGAGATGGTGGGCGCGATAAAGGTGTTGCGCGACGGGTTCGTGAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATTGAGAGCATGCGGATGGAGATGGAGATGAAGCGCACGGAGATGATCCTGGACTCTCAGCAGAGGATCGTGGAGGCTTTCGCCAGAGCCGTTTCGCAAAAGAGGAGCAAGGGCAAGTCCACGCCTTCTCCCTCGTCGCAACCCTGA 951 0.633 MASPSSPTDSNPPSAVPLPLPAPPSTSSRRLPPPCWTPEETAALIDAYRDKWYSLGRTNLKATHWQEVADAVTAQCPNASPTAKTAVQCRHKMEKLRKRYRTEIQRLRSLPLPRLINNSTTASPSSWVHFKSMDSMEKGPNKPHTDTTTATNPSTPSNNLNFPDDDNDDDLYEEFKNAPGSNTRSLNKLYKNGFGSGSGSGFRIRIPAGVPNHTPSKFFSAPPPGMAPRNGAKRERESDAVAEMVGAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRIVEAFARAVSQKRSKGKSTPSPSSQP* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0501 316 PANTHER TRANSCRIPTION FACTOR 4 311 - -
Pvu8g0501 316 Coils Coil 262 282 - -
Pvu8g0501 316 MobiDBLite consensus disorder prediction 1 35 - -
Pvu8g0501 316 ProSiteProfiles Myb-like domain profile. 36 97 IPR001005 -
Pvu8g0501 316 SMART 118neu2 43 141 IPR006578 -
Pvu8g0501 316 Pfam Myb/SANT-like DNA-binding domain 34 136 IPR044822 -
Pvu8g0501 316 MobiDBLite consensus disorder prediction 142 162 - -
Pvu8g0501 316 MobiDBLite consensus disorder prediction 132 166 - -
Pvu8g0501 316 MobiDBLite consensus disorder prediction 10 31 - -
Pvu8g0501 316 Coils Coil 90 110 - -
Pvu8g0501 316 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 311 IPR044823 -
Pvu8g0501 316 MobiDBLite consensus disorder prediction 215 235 - -
Pvu8g0501 316 Gene3D - 36 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0501 Pvu-Chr8 4333878 4335549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0501 35 153 Trihelix Transcription Factor Family AT3G14180 30.252 7.29e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu8g0501 Myb_DNA-bind_4 7.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0501 - - gmx:102665993 452.595