Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0490 ATGCTCCTCTGTCACTCTCTTCATCTCCCAATACTATCTTCTTACTCACACAAATCAACCCGCGCTCCCAACACCAGCGGTTATATAAAGTTCCAAACCAGGTACCGCCAAAACCTCCAATACCTTCGAACTTTAACCATAATCGACCCCAAAACCAAACCGGAGGACCTCCCTCTCCCCACCGATGTCGACCACATCCTCCACACTCTCACCTTCCTCAAGTCGCGCTCCTTCTCCGACGCCGACATCCCCCGCCTCAACTACCTCACCCCTCAACTCTTCTCCACCGCCGTCCTCCCCTCCGACGTCGCCGCCGTGTTCTGCTTCCTGGCCGACGAAGTTCAGGCCACCGCGTCGGAGTCCCGCGAGCTCATCCTCCGATGCCCCAAGCTGCTCTTCTCCCACGTCGACCTCTGCCTCCGACCCACGCTCCAATTTCTCCGGCAGATTGGAATGCAGGGGCTGAAAAAGCCCACTTACGCACACCTGCTGAACACGCGGGTGCATAAGCTGCACGCGAAGGTTGAGTTCTTGCAGGAGTTGGGGTTTTCTTACGAGGAGGCACAAAAAGTATGTGTAAGGTTGCCGGCCATTTTCCGTTATGACGTGGAGAACAATCTATGGCCAAAGTACGTGTATCTTGTGAAGGAAATGGAGAGGGATTTGGAGGAGTTGAAGAAGTTTCCTCAGTACTTTGGGTTCAGTTTGAAGGAGAGGATTATGCCAAGGCACTTGCATTTGAAGGAGAGGGGTGTTAGGATTCCCTTGAACAGAATGTTGATGTGGGGTGATGAAAAGTTCTACAAGAAGTGGAAGTGA 819 0.5287 MLLCHSLHLPILSSYSHKSTRAPNTSGYIKFQTRYRQNLQYLRTLTIIDPKTKPEDLPLPTDVDHILHTLTFLKSRSFSDADIPRLNYLTPQLFSTAVLPSDVAAVFCFLADEVQATASESRELILRCPKLLFSHVDLCLRPTLQFLRQIGMQGLKKPTYAHLLNTRVHKLHAKVEFLQELGFSYEEAQKVCVRLPAIFRYDVENNLWPKYVYLVKEMERDLEELKKFPQYFGFSLKERIMPRHLHLKERGVRIPLNRMLMWGDEKFYKKWK* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0490 272 PANTHER CGI-12 PROTEIN-RELATED 16 272 IPR003690 GO:0003690|GO:0006355
Pvu8g0490 272 Pfam mTERF 160 267 IPR003690 GO:0003690|GO:0006355
Pvu8g0490 272 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 16 272 - -
Pvu8g0490 272 SMART mt_12 155 184 IPR003690 GO:0003690|GO:0006355
Pvu8g0490 272 SMART mt_12 189 221 IPR003690 GO:0003690|GO:0006355
Pvu8g0490 272 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Pvu8g0490 272 SMART mt_12 122 153 IPR003690 GO:0003690|GO:0006355
Pvu8g0490 272 Gene3D Transcription termination factor 3, mitochondrial 29 272 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0490 Pvu-Chr8 4271229 4273541 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu8g0490 mTERF 2.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0490 K15032 - gmx:100812333 468.003