Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0489 ATGGAAGGAGAGAGAGGTGGTGCTCCCAATTATGAGCTTCAAGTTTCATTCACCAACACCCCACAAGCCATACACGAATTGGGTTTTGTTCAGTATGAAGAAAACCAGGTCCTTGGCTTCTTATCACCCTCTTCACAATCTCAATCTTCTCACCTCTCTCAATCCTTAAATACTGATGTAGTTGTTAATACTACCACTACAACTGCAGCAACCATCGGATTCATGAATCACACTCCACTTGTCACCAAAACTTGGAATAACGACCAGGTGGGAACTCTGGATCCAAAGGCTGCAGATGAAGAAAACTGCACTGAAAATGCTAGTGAAGGCAACAACAACGTTTGGTGGAGGAGCGCAGCAGCTACAGAGAAGAACAAGGTGAAGATAAGGAGAAAACTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGCGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAACAGCCTTCATCCGAG 509 0.4342 MEGERGGAPNYELQVSFTNTPQAIHELGFVQYEENQVLGFLSPSSQSQSSHLSQSLNTDVVVNTTTTTAATIGFMNHTPLVTKTWNNDQVGTLDPKAADEENCTENASEGNNNVWWRSAAATEKNKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0489 169 SUPERFAMILY WRKY DNA-binding domain 141 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0489 169 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 14 169 - -
Pvu8g0489 169 Gene3D WRKY domain 136 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0489 169 ProSiteProfiles WRKY domain profile. 144 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0489 169 Pfam WRKY DNA -binding domain 150 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0489 169 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 169 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0489 Pvu-Chr8 4258051 4259563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0489 3 169 WRKY Transcription Factor Family AT2G44745 48.603 4.83e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g0489 WRKY 8.9e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0489 - - pvu:PHAVU_008G0481000 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0489 8 4258051 4259563 Pvu8g0489 8 4258051 4259563 ECH
Pvu10g0482 10 7105698 7106642 Pvu8g0489 8 4258051 4259563 PCT