Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu8g0489 | ATGGAAGGAGAGAGAGGTGGTGCTCCCAATTATGAGCTTCAAGTTTCATTCACCAACACCCCACAAGCCATACACGAATTGGGTTTTGTTCAGTATGAAGAAAACCAGGTCCTTGGCTTCTTATCACCCTCTTCACAATCTCAATCTTCTCACCTCTCTCAATCCTTAAATACTGATGTAGTTGTTAATACTACCACTACAACTGCAGCAACCATCGGATTCATGAATCACACTCCACTTGTCACCAAAACTTGGAATAACGACCAGGTGGGAACTCTGGATCCAAAGGCTGCAGATGAAGAAAACTGCACTGAAAATGCTAGTGAAGGCAACAACAACGTTTGGTGGAGGAGCGCAGCAGCTACAGAGAAGAACAAGGTGAAGATAAGGAGAAAACTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGCGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAACAGCCTTCATCCGAG | 509 | 0.4342 | MEGERGGAPNYELQVSFTNTPQAIHELGFVQYEENQVLGFLSPSSQSQSSHLSQSLNTDVVVNTTTTTAATIGFMNHTPLVTKTWNNDQVGTLDPKAADEENCTENASEGNNNVWWRSAAATEKNKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHP | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu8g0489 | 169 | SUPERFAMILY | WRKY DNA-binding domain | 141 | 169 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu8g0489 | 169 | PANTHER | WRKY TRANSCRIPTION FACTOR 12-RELATED | 14 | 169 | - | - | |
Pvu8g0489 | 169 | Gene3D | WRKY domain | 136 | 169 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu8g0489 | 169 | ProSiteProfiles | WRKY domain profile. | 144 | 169 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu8g0489 | 169 | Pfam | WRKY DNA -binding domain | 150 | 169 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pvu8g0489 | 169 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 14 | 169 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu8g0489 | Pvu-Chr8 | 4258051 | 4259563 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu8g0489 | 3 | 169 | WRKY Transcription Factor Family | AT2G44745 | 48.603 | 4.83e-36 | 122 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pvu8g0489 | WRKY | 8.9e-06 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu8g0489 | - | - | pvu:PHAVU_008G0481000 | 319.316 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pvu8g0489 | 8 | 4258051 | 4259563 | Pvu8g0489 | 8 | 4258051 | 4259563 | ECH | |
Pvu10g0482 | 10 | 7105698 | 7106642 | Pvu8g0489 | 8 | 4258051 | 4259563 | PCT |