Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0485 ATGGAATGCACGTTTGAAAGGGAAAAATCCATGCTGGTTCTATTTCTTTGTGTCTTTCTAACACTCTCGGGGCCACAAGCTGCAGCTGAAGACAGTGAAGCAAATGCTTTGTTGAAGTGGAAACACAGCTTTGACAACCACAGCCAAGCTCTCTTGTCAACATGGAGAGGTAATAATCCATGCACATGGGAAGGAATTCAGTGTGACAAATCTAAGTCTGTGTCCAGCATAAATCTTGCTACCTATGGACTTAAAGGTACACTCCACACTCTCAGCTTCTCCATTTTTCCTAACCTTCTCAGCCTGAATATCTATGAAAATTCCTTTCATGGAACCATTCCACCACAGATTGGTAACATAACCAAAGTAAATGTTTTAAATTTTTCTTTAAATTCTTTCCAAGGTTCCATCCCTCCAGAAATGTGGACACTAGGGAGTTTACAAAGCCTTGATCTTTCCTTGTGTCACCTAAGTGGAGAGATTCCTAATTCCATAGCAAACTTGTCCAACCTGTCATTTCTAGATTTAGGTGGCAACAATTTTTCTAGCTCCATTCCTCCAGGGATTGGAAAGTTGCACAAGTTGGAGTATCTAGGTTTGGGAAATTGTAACCTTTTTGGTTCCATTCCTCAAGAAATTGGAATGTTGACAAACCTTGAACTTATTGATTTGTCAAGAAACTCTCTTTCTGGTTCTATCCCTGAAACAATAGGTAACATGAGCAGTTTAAATCAACTTTACCTTTCTAATAATTCCCTAATATCTGGGCCAATCCCATCCTCCTTATGGAACATGTCTAACTTGACCGTGCTCTACCTTGAAGCCAATAATCTTTCTGGATCAATCCCTGCTTCCATACAAAATCTGGCTAATTTAGAGGAACTTGCTCTTGATATCAATCAATTTTCCGGACCCATTCCTTCCACCATTGGAAACTTGACAAAGCTCACCATGTTGTATTTAGGCTTTAATAATCTTTCTGGATCAATTCCTCCCTCTATAGGTAATTTGATCAATTTGAATGCCCTGAGTCTCCAAGCAAACAATCTCTCTGGACCAATTCCTGACACAATTGGAAAATTGAAAATGCTCACAGTTTTGGAATTGTCCACTAACAAACTTAATGGCACCATTCCACAAGGCTTGAATGACATTACCAACTGGAATTCCTTGTTACTTGCTGAGAATGATTTCACAGGCCATTTACCTCCTCAAATTTGCTCGGCTGGGTCACTGGAGTTCTTTAGTGCTTATGACAACCGTTTCACGGGTCCAGTGCCAAGAAGCTTAAAGAATTGCTCTAGTATTGCTAGACTCAGGATGCAAGGAAACCAATTGGAAGGGGATATAGCACAAGATTTTGGTGTATATCCAAATTTGAAGTACATTGATTTGAGTGACAATAAATTTCATGGTCACATTTCACCAAACTGGGGGAAGTGTCCTAATCTTGGCACCTTCAAGATATCCAACAATAATATTTCCGGTGGTATACCAATAGAACTTTTTAGGGAAACCAAGCTAGGTGTGCTTCACCTTTCTTCTAATCACTTGAGTGGAAAGCTTCCAAAGGAATTAGGGAATATGGAATCGTTATTTCAACTCAAGATTAGCAATAACCATCTTTCTGGAAACATTCCAACAGAATTTGGATTACTGAAAAATCTTGAAGAATTGGATCTGGGAGATAACGACCTGAGTGGCACAATACCAATAGAAGTTGTGAAATTGCACAAGTTACGGAATTTGAATTTGAGCAAAAACAAAATTGATGGAAGCATTCCCTCTCAGTTTAGCCAATCCTTAGTATTGCTTGATCTTAGTGTCAATTTGTTGACAGGAACAATACCAACAAATATTGGAGAGTTGCAAAGCTTGTTCATGTTGAATCTCTCACATAATAGTCTTTCTGGCACCATTCCTTCCACTTTTAGCAGAGCATTGAGTATCTTCAACATATCAGACAACCAATTAGAAGGGCCAATTCCAAATATTCCACTTTTTCTTGATGCTCCAATTGAATCATTGAAAAATAATAAAGGCTTATGTGGTAATGTCACGGGATTGGTTCTTTGTCCAACCAACCATAATCAAAAGAGAAACAAAGTGATCCTAGTGGCACTCCTTAGTTTAGGAGCTCTAGTACTAGTGCTATGTGGGGTGGCACTTTCAAAGTATATTTTTTGTCGTGGTAAAAGAAGAGGAGAAAGTCATTCTAATTCTGAAGAAGCGCCAAGGAATGTACTCTTTTCCATATGGAGCTACGATGGGAAAATGATGTTTGAAAATATCATTGAAGCTACAGAGAATTTTGATGACAAATATCTCATTGGAGCAGGAAGTCAAGGATATGTTTACAAGGTGGTGTTGCCTTCAGGTTTGGTTGTTGCTGTGAAGAAACTTCATTCAGTGATAAATGAGGAAATGTCAGAATTTAGTTCAAAGGCTTTTGCAAGTGAGATTAAAGCATTGACAGAAATCAAACATCGGAACATTATAAAGTTGCATGGATTTTGCTCACATTCACAGGTCTCATTTTTGGTCTATCAGCTCATGGAAGGGGGTAGCTTGGATCAATTGCTGAACAAAGATACACAAGCAACGGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCCAATGCTTTATCTTATTTGCACCATGATTGCTCACCTCCAATTGTTCATCGGGACATATCAAGTAAAAATGTTCTTTTGGATCTTGAGTATGAAGCTCATGTCTCTGACTTTGGGACTGCTAAGTTTTTGAAGCCTAGTTCAGATAGTTGGACTCAATTCGCAGGCACCTTTGGGTATGCTGCTCCAGAGTTGGCCCAGACAATGGAAGTGAATGAGAAATGTGATGTTTATAGCTTTGGAGTACTTGCTTTGGAAATCATTATGGGAAAACATCCAAGAGATCTCATTTCTCAATTTGTGTCACCTTCTATGCCACCAACTGTTCAAGATTTGCTATTGGCTGATGTTTTAGATCAACGGCCTCCTCAACCTACAAAACCAATTGATGGGGAGGTGATCTTAATCGTAAGGTTAGCACTTGCTTGCTTGAGTCAAAATCCACGTTCCCGCCCAACCATGGAACAAGTATCCAAGGCATTTGGAACAGGAAAATCACCTTTGCCTGACCTATTTCCTATGATCAGACTGGGACAACTCTGCTGA 3192 0.3935 MECTFEREKSMLVLFLCVFLTLSGPQAAAEDSEANALLKWKHSFDNHSQALLSTWRGNNPCTWEGIQCDKSKSVSSINLATYGLKGTLHTLSFSIFPNLLSLNIYENSFHGTIPPQIGNITKVNVLNFSLNSFQGSIPPEMWTLGSLQSLDLSLCHLSGEIPNSIANLSNLSFLDLGGNNFSSSIPPGIGKLHKLEYLGLGNCNLFGSIPQEIGMLTNLELIDLSRNSLSGSIPETIGNMSSLNQLYLSNNSLISGPIPSSLWNMSNLTVLYLEANNLSGSIPASIQNLANLEELALDINQFSGPIPSTIGNLTKLTMLYLGFNNLSGSIPPSIGNLINLNALSLQANNLSGPIPDTIGKLKMLTVLELSTNKLNGTIPQGLNDITNWNSLLLAENDFTGHLPPQICSAGSLEFFSAYDNRFTGPVPRSLKNCSSIARLRMQGNQLEGDIAQDFGVYPNLKYIDLSDNKFHGHISPNWGKCPNLGTFKISNNNISGGIPIELFRETKLGVLHLSSNHLSGKLPKELGNMESLFQLKISNNHLSGNIPTEFGLLKNLEELDLGDNDLSGTIPIEVVKLHKLRNLNLSKNKIDGSIPSQFSQSLVLLDLSVNLLTGTIPTNIGELQSLFMLNLSHNSLSGTIPSTFSRALSIFNISDNQLEGPIPNIPLFLDAPIESLKNNKGLCGNVTGLVLCPTNHNQKRNKVILVALLSLGALVLVLCGVALSKYIFCRGKRRGESHSNSEEAPRNVLFSIWSYDGKMMFENIIEATENFDDKYLIGAGSQGYVYKVVLPSGLVVAVKKLHSVINEEMSEFSSKAFASEIKALTEIKHRNIIKLHGFCSHSQVSFLVYQLMEGGSLDQLLNKDTQATAFDWEKRVNVVKGVANALSYLHHDCSPPIVHRDISSKNVLLDLEYEAHVSDFGTAKFLKPSSDSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPRDLISQFVSPSMPPTVQDLLLADVLDQRPPQPTKPIDGEVILIVRLALACLSQNPRSRPTMEQVSKAFGTGKSPLPDLFPMIRLGQLC* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0485 1063 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 174 - -
Pvu8g0485 1063 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 244 1062 - -
Pvu8g0485 1063 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 170 243 - -
Pvu8g0485 1063 SUPERFAMILY RNI-like 76 399 - -
Pvu8g0485 1063 SUPERFAMILY RNI-like 343 660 - -
Pvu8g0485 1063 Gene3D Ribonuclease Inhibitor 383 693 IPR032675 -
Pvu8g0485 1063 SUPERFAMILY Protein kinase-like (PK-like) 753 1041 IPR011009 -
Pvu8g0485 1063 ProSitePatterns Tyrosine protein kinases specific active-site signature. 897 909 IPR008266 GO:0004672|GO:0006468
Pvu8g0485 1063 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Pvu8g0485 1063 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 174 - -
Pvu8g0485 1063 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 170 243 - -
Pvu8g0485 1063 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 244 1062 - -
Pvu8g0485 1063 Pfam Leucine Rich Repeat 146 168 IPR001611 GO:0005515
Pvu8g0485 1063 Pfam Leucine Rich Repeat 267 289 IPR001611 GO:0005515
Pvu8g0485 1063 Pfam Protein kinase domain 773 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0485 1063 SMART LRR_sd22_2 216 242 - -
Pvu8g0485 1063 SMART LRR_sd22_2 265 291 - -
Pvu8g0485 1063 SMART LRR_sd22_2 313 339 - -
Pvu8g0485 1063 SMART LRR_sd22_2 361 384 - -
Pvu8g0485 1063 SMART LRR_sd22_2 168 200 - -
Pvu8g0485 1063 SMART LRR_sd22_2 553 585 - -
Pvu8g0485 1063 SMART LRR_typ_2 168 192 IPR003591 -
Pvu8g0485 1063 SMART LRR_typ_2 144 167 IPR003591 -
Pvu8g0485 1063 SMART LRR_typ_2 361 385 IPR003591 -
Pvu8g0485 1063 SMART LRR_typ_2 577 601 IPR003591 -
Pvu8g0485 1063 SMART LRR_typ_2 265 288 IPR003591 -
Pvu8g0485 1063 SMART LRR_typ_2 216 240 IPR003591 -
Pvu8g0485 1063 SMART LRR_typ_2 313 337 IPR003591 -
Pvu8g0485 1063 SMART LRR_typ_2 553 576 IPR003591 -
Pvu8g0485 1063 SMART LRR_typ_2 623 647 IPR003591 -
Pvu8g0485 1063 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Pvu8g0485 1063 ProSiteProfiles Protein kinase domain profile. 771 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0485 1063 Gene3D Ribonuclease Inhibitor 185 281 IPR032675 -
Pvu8g0485 1063 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Pvu8g0485 1063 Gene3D Ribonuclease Inhibitor 282 382 IPR032675 -
Pvu8g0485 1063 Gene3D Phosphorylase Kinase; domain 1 734 850 - -
Pvu8g0485 1063 Gene3D Transferase(Phosphotransferase) domain 1 852 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0485 Pvu-Chr8 4221436 4225204 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0485 1 945 Receptor kinase-like Gene Family AT4G08850 43.880 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g0485 Pkinase 4.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0485 - - gmx:100814634 1422.14