Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0483 ATGGAATCCATCAAGATTCTAGCCTTATGGCGGATTCTGTCCTCCTTTCTTTTGGCCTTTCTAACACACTCTTCACTCCAACTTGCTTGGTTTTCCAAAACAGTAGTTTTGGCCTCTGCTGCCAGCACAGGAACTGTTGGTGATCAAGCTGCAGCTGATAAGAATGAAGCAAATGCACTGTTAAAGTGGAAACACAGCTTTGATAATAACAGCCAAGATCTCTTGTCAACTTGGACAGGTTCTACTTCATGTCAATGGCAAGGAATTCAGTGTGACAAATCCATGTTGGTCTCCAGCATAAATCTTGCAAATTACGGACTGACAGGCCATTTACCACCTCAAATTTGCTCTGCTGGGTCCCTAATATCCCTTAGTGCTCATCACAACCATTTCACTGGTCCAGTGCCAATAAGCTTAAAGAACTGTCCTACTATTACTAGACTCAGGCTGGAAGGAAACCAATTGGAAGGAGATATAGCACAGGATTTTGGTGTATATCCAAATTTGGTATACATTGATTTGAGCGACAATAAGTTTTACGGCCAAATTTCACCAAACTGGGGGAAGTGTCCTAATCTTGGTACCTTAAGGATATCCAACAATAACATTTCTGGTGGTATACCAGTAGAACTTGTTGAGGCAACCAACCTAGGCAAGCTTCACCTTTCTTCTAACCACTTGAATGGAAAGATTCCAAAGGAATTTGGGAATATGAAATCCTTAATTGAACTCAAGATTAGCAACAACCATCTTTCTGGAGACATTCCAAAAGAAATCGGATCACTGAAAAATCTGGAACAGTTGGATCTTGCAGAAAACCAGTTGAGTGGAACAATACCGATAGAAGTTGTAGAATTGCCCAAGTTACGAAACTTGACTTTGAGCAATAATAAAATAAACGGAAATATTCCCTCGGAGTTTAGCCAATTTCAGCCTCTTGAATATCTTGATCTTAGTGGGAATTTGTTGAGTGGAACTATACCGAGGCAGCTTGGAGAGATGAAGCTACTGCAATCGCTGAATCTCTCTCACAACAATCTTTCTGGAAATATTCCATCCAGTTTCGATGGCATTTCAGGTTTGATTTCGGTCAACATATCATACAACCAGTTAGAAGGGCCACTTCCGAATAATAAAGCTTTTCTTAATGCTTCTATTGAATCATTGAAAAATAACAGAGGCTTGTGTGGCAACCTCACTGGCTTGATTCTTTGCCCAAGCAACAACAGTCAGAAGAGGCACAAGGGCATTCAACCAGCATTATTCATTGCCTTGGGTGCTCTTTTTCTAGTATTAGGTGGGGTGTCAGTTTCACTGTATATTCTCTGTCGAAAAACAAGAAAGAAAGATATACATGCTAAAGAAAATGTACATTCAGGAAAAGCAGTGTCTGGAGAAGTGTTTTCCATATGGAGTCACGATGGAAAAATTATGTTTGAAAATATCATTGAAGCTACCGATAATTTCAACGAAAAATATCTGATTGGACTTGGAGGGCAAGGATCTGTTTACAAAGCTGAGATGCCTGCAGGCCAGGTTTTTGCGGTGAAGAAACTTCATTTGGAAAATGAAGAGAAGCCTAATTTTAAAGCTTTTGAAAATGAAATTCAAGCTCTGACAGAAATCAGGCACCGTAACATTGTAAAGCTGTGTGGATTTTGCTCACATTCACAGTTCTCATTTTTGGTCTACGAGTTCTTGGAAGGGGGTAGCTTGGATCAAATACTAATCCATGAAAAAAAAGCAGCTGCATTTGAGTGGGAAATGAGGGTAAATGCTGTTAAAGGTGTGGCCTATGCTTTATCCTATATGCATCACGATTGCTCACCACCAATAATTCATCGAGACATATCCAGCAAGAATATTCTTTTAGATTCACAAAAAGAAGCTCATATCTCTGATTTTGGAACAGCTAAGATTCTAAAACCTGGTTCACGCACTTGGACCACGTTTGCAGGCACCTTTGGGTATGCAGCTCCAGAGCTTGCCCTGACTATGGAAGTGAGTGAGAAATGTGATGTATTCAGTTTTGGAGTGCTTTGTCTAGAAATCATCATGGGGAAGCATCCTGGGGATCTGATATCTTCGTTGTTATCTTCATCTTCAGCAGCAATAACTCATAGCTTGCTACTAATTGATGTAATAGACCAAAGACCTCCTCATCCTCCTAAATGGGTTGTTGGGGAAGTCATTTTGGTTGCAAGCTTGGCTTTTTCTTGCTTGAGTGAAAATCCATGTTCTCGTCCAACCATGGATCAAGTGGCCAAAAAGCTTATGATGGGTAAATCACCTTTAGCAGATAAGTTCCCCAAGATCAGACTTGCACAACTCCTCTAA 2337 0.4035 MESIKILALWRILSSFLLAFLTHSSLQLAWFSKTVVLASAASTGTVGDQAAADKNEANALLKWKHSFDNNSQDLLSTWTGSTSCQWQGIQCDKSMLVSSINLANYGLTGHLPPQICSAGSLISLSAHHNHFTGPVPISLKNCPTITRLRLEGNQLEGDIAQDFGVYPNLVYIDLSDNKFYGQISPNWGKCPNLGTLRISNNNISGGIPVELVEATNLGKLHLSSNHLNGKIPKEFGNMKSLIELKISNNHLSGDIPKEIGSLKNLEQLDLAENQLSGTIPIEVVELPKLRNLTLSNNKINGNIPSEFSQFQPLEYLDLSGNLLSGTIPRQLGEMKLLQSLNLSHNNLSGNIPSSFDGISGLISVNISYNQLEGPLPNNKAFLNASIESLKNNRGLCGNLTGLILCPSNNSQKRHKGIQPALFIALGALFLVLGGVSVSLYILCRKTRKKDIHAKENVHSGKAVSGEVFSIWSHDGKIMFENIIEATDNFNEKYLIGLGGQGSVYKAEMPAGQVFAVKKLHLENEEKPNFKAFENEIQALTEIRHRNIVKLCGFCSHSQFSFLVYEFLEGGSLDQILIHEKKAAAFEWEMRVNAVKGVAYALSYMHHDCSPPIIHRDISSKNILLDSQKEAHISDFGTAKILKPGSRTWTTFAGTFGYAAPELALTMEVSEKCDVFSFGVLCLEIIMGKHPGDLISSLLSSSSAAITHSLLLIDVIDQRPPHPPKWVVGEVILVASLAFSCLSENPCSRPTMDQVAKKLMMGKSPLADKFPKIRLAQLL* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0483 778 Gene3D Transferase(Phosphotransferase) domain 1 567 768 - -
Pvu8g0483 778 Gene3D Ribonuclease Inhibitor 212 282 IPR032675 -
Pvu8g0483 778 ProSitePatterns Tyrosine protein kinases specific active-site signature. 612 624 IPR008266 GO:0004672|GO:0006468
Pvu8g0483 778 Gene3D Phosphorylase Kinase; domain 1 449 566 - -
Pvu8g0483 778 ProSiteProfiles Protein kinase domain profile. 489 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0483 778 Pfam Leucine rich repeat 287 347 IPR001611 GO:0005515
Pvu8g0483 778 Pfam Leucine rich repeat 216 275 IPR001611 GO:0005515
Pvu8g0483 778 Pfam Protein kinase domain 490 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0483 778 SUPERFAMILY RNI-like 99 391 - -
Pvu8g0483 778 PANTHER LRR RECEPTOR-LIKE KINASE 107 777 - -
Pvu8g0483 778 PANTHER LRR RECEPTOR-LIKE KINASE 14 109 - -
Pvu8g0483 778 Gene3D Ribonuclease Inhibitor 53 211 IPR032675 -
Pvu8g0483 778 Gene3D Ribonuclease Inhibitor 283 402 IPR032675 -
Pvu8g0483 778 SUPERFAMILY Protein kinase-like (PK-like) 475 758 IPR011009 -
Pvu8g0483 778 Pfam Leucine rich repeat N-terminal domain 54 92 IPR013210 -
Pvu8g0483 778 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 109 - -
Pvu8g0483 778 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 107 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0483 Pvu-Chr8 4195366 4198972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0483 88 660 Receptor kinase-like Gene Family AT4G08850 45.969 5.38e-164 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g0483 Pkinase 8.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0483 - - vra:106759489 1137.09