Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0463 ATGAATCGTAGGAGGAAGGTAGCCAGGAAAAGCAAAGGGAATGTAGTGCAATCTAGTTCCCCTGAAGTTGTTGATTGGAACTGCTTGCCTGATGACACAGTAATTCAGCTGTTATCATGTCTGAGTTACCGAGATCGAGCTAGCTTGTCGTCAACTTGTAAGACATGGAGGTCTCTTGGTAGCTCCCCGTGTTTGTGGACTTCTCTGGATCTTCGTTCGCACAGGTTTGATGCTGGCATGGCTTCATCACTTGCTCCCAGGTGTGTGCATCTACAGAAGCTCAGGTTTCGGGGGGCGGAGTCTGCTGATGCAATAATTCATCTTCGAGCTAAGAACTTGCGTGAATTGAGCGGTGACTATTGCAGGAAGATTTCTGATGCAACTCTTTCAGTGATTGTGGCTCGGCATGAGTCACTTGAGAGCCTTCAGCTTGGACCAGATTTTTGTGAGAGAATAAGTAGTGATGCTATTAAAGCAATAGCTCATTGCTGCCCTAACTTGAATAAGCTTAGACTCTCGGGCATCAGAGATGTAAATGCTGATGCTATTAATACTTTGGCTAAACATTGTTCTAAGTTGACTGATATTGGGTTCATTGACTGTCTGAATGTTGACGAGGTTGCACTGGGAAATGTGTTATCAGTTCGTTTCCTTTCTGTGGCGGGGACATCAAGTATGAAGTGGGGAGTGGTTTCCCATCTTTGGCATAAAATTCCTAACCTAATTGGGTTAGATGTTTCAAGAACTGATATTGGTCCATCAGCTGTTTTCAGAATGTTATCCTTATCACAGAATTTGAGGGTTTTGATTGCTCTGAATTGTCCTGTCCTTGAAGAAGACACTAGCTTTTCTGCTAGTAAATATAAAAACAAGTTATTAGTTTCCCTTCGTACTGATGTTTTTAAAGGATTGGCTTCTTTATTTTTTGATAATACAAAGAAAGGAAAGAATGTGTTTTTGGACTGGAGGACCTCAAAGAATAATGATAAGGACCTTAATGAAATTATACCGTGGCTTGAGTGGATGCTATCCCACACACTTTTGCGTTCTGCTGAGAGTCCTCAGCAGGGTCTTGATAATTTCTGGGTTGAACAAGGTGGAGCACTTTTGCTTAGTCTAATGCAGAGTTCTCAAGAGGATGTTCAAGAGAGGGCAGCCACAGGACTTGCAACTTTTGTTGTAATTGATGACGAAAATGCTAGCATAGATTGTGGAAGGGCTGAAGCAGTTATGCGAGATGGAGGCATACGCCTCCTACTTGCCCTGGCAAAATCTTGGAGGGAAGGGCTTCAATCTGAGGCGGCTAAGGCCATTGCAAATTTGTCTGTCAATGCCAATGTGGCCAAAGCTGTTGCAGAAGAAGGTGGGATTGAGATTCTTGCTGGTTTGGCTAGGTCTATGAACAAGCTGGTGGCTGAAGAGGCTGCTGGAGGATTATGGAATCTCTCTGTTGGAGAAGAGCACAAGGGTTCTATTGCTGAAGCTGGGGGAATACAAGCTTTAGTTGATCTTATATTCAAGTGGTCCTCTAGTGGAGATGGAGTTTTAGAACGGGCGGCTGGTGCATTGGCTAATTTGGCAGCTGATGACAAGTGTAGTACAGAGGTTGCACTGGCAGGAGGTGTACATGCTCTGGTGATGCTTGCACGTAAGTGCAAATTTGAGGGAGTGCAAGAGCAGGCTGCACGTGCATTGGCTAACTTAGCTGCTCATGGAGATAGTAACAGTAACAATGCTGCTGTTGGACAAGAAGCAGGTGCTCTTGAGGCTCTTGTTCAACTTACTCGTTCTCCCCATGAGGGCGTCAGGCAAGAGGCTGCTGGTGCACTTTGGAATTTGTCATTTGACGATAAAAATCGAGAAGCCATTGCCGCATCTGGTGGAGTTCAGGCCTTGGTTGCTCTTGCCCAAGCTTGTGCTAATGCCTCCCCTGGACTTCAAGAGAGGGCTGCTGGAGCTCTGTGGGGATTGTCAGTTTCGGAAATTAATAGTGTTGCCATTGGACGAGAAGGGGGCGTTGCACCTCTGATTGCACTTGCACGGTCTGAAGCAGAGGATGTTCATGAAACTGCCGCAGGGGCACTATGGAATCTTGCTTTCAATGCTAGTAATGCTCTACGAATAGTAGAGGAAGGTGGAGTATCTGCACTTGTTGATCTCTGTTCCTCATCAGTATCAAAAATGGCACGCTTCATGGCTGCGTTGGCATTGGCTTACATGTTTGACGGGAGGATGGATGAATATGCACCAGGCATTCCATCTGAAAGTACTTCTAAGAGTGTGAGTTTGGATGGAGCCAGAAGGATGGCTTTGAAACACATTGAAGCTTTTGTTCTTATGTTCTCTGATCCACAAGCATTTGCGGCTGCTGCTGCATCATCTGCCCCTGCAGCATTAGCACAGGTTACTGAAGGTGCTCGTATTCAAGAAGCAGGACATCTAAGATGCAGTGGTGCTGAAATTGGAAGATTCATCACTATGCTACGAAATCCCTCATCTATACTCAAGGCTTGTGCAGCATTTGCCCTTCTCCAGTTTACAATTCCTGGTGGACGACATGCCATGCACCATGCTGACCTCATGCAGAAATTGGGGGCACCGCGAATTCTGCGTGGCGCGGCTGCAGCAGCAACTGCCCCACTTGAAGCAAAAATCTTTGCCCGAATTGTTCTCCGCAATCTTGAGTATCATCTGATAGAGCACACAGTGTAG 2712 0.4587 MNRRRKVARKSKGNVVQSSSPEVVDWNCLPDDTVIQLLSCLSYRDRASLSSTCKTWRSLGSSPCLWTSLDLRSHRFDAGMASSLAPRCVHLQKLRFRGAESADAIIHLRAKNLRELSGDYCRKISDATLSVIVARHESLESLQLGPDFCERISSDAIKAIAHCCPNLNKLRLSGIRDVNADAINTLAKHCSKLTDIGFIDCLNVDEVALGNVLSVRFLSVAGTSSMKWGVVSHLWHKIPNLIGLDVSRTDIGPSAVFRMLSLSQNLRVLIALNCPVLEEDTSFSASKYKNKLLVSLRTDVFKGLASLFFDNTKKGKNVFLDWRTSKNNDKDLNEIIPWLEWMLSHTLLRSAESPQQGLDNFWVEQGGALLLSLMQSSQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLALAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIEILAGLARSMNKLVAEEAAGGLWNLSVGEEHKGSIAEAGGIQALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARKCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDKNREAIAASGGVQALVALAQACANASPGLQERAAGALWGLSVSEINSVAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNASNALRIVEEGGVSALVDLCSSSVSKMARFMAALALAYMFDGRMDEYAPGIPSESTSKSVSLDGARRMALKHIEAFVLMFSDPQAFAAAAASSAPAALAQVTEGARIQEAGHLRCSGAEIGRFITMLRNPSSILKACAAFALLQFTIPGGRHAMHHADLMQKLGAPRILRGAAAAATAPLEAKIFARIVLRNLEYHLIEHTV* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0463 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 627 672 IPR000225 GO:0005515
Pvu8g0463 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 455 497 IPR000225 GO:0005515
Pvu8g0463 903 SMART LRR_CC_2 164 189 IPR006553 -
Pvu8g0463 903 SMART LRR_CC_2 190 215 IPR006553 -
Pvu8g0463 903 SMART LRR_CC_2 136 163 IPR006553 -
Pvu8g0463 903 SMART LRR_CC_2 110 135 IPR006553 -
Pvu8g0463 903 Gene3D - 368 489 IPR011989 -
Pvu8g0463 903 SUPERFAMILY ARM repeat 351 730 IPR016024 -
Pvu8g0463 903 SUPERFAMILY RNI-like 24 279 - -
Pvu8g0463 903 PANTHER PROTEIN ARABIDILLO 1-LIKE 15 898 - -
Pvu8g0463 903 Gene3D Ribonuclease Inhibitor 19 296 IPR032675 -
Pvu8g0463 903 Pfam F-box-like 26 72 IPR001810 GO:0005515
Pvu8g0463 903 SMART fbox_2 29 69 IPR001810 GO:0005515
Pvu8g0463 903 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
Pvu8g0463 903 SMART arm_5 444 484 IPR000225 GO:0005515
Pvu8g0463 903 SMART arm_5 575 615 IPR000225 GO:0005515
Pvu8g0463 903 SMART arm_5 485 528 IPR000225 GO:0005515
Pvu8g0463 903 SMART arm_5 616 659 IPR000225 GO:0005515
Pvu8g0463 903 SMART arm_5 660 700 IPR000225 GO:0005515
Pvu8g0463 903 SMART arm_5 529 570 IPR000225 GO:0005515
Pvu8g0463 903 SMART arm_5 701 742 IPR000225 GO:0005515
Pvu8g0463 903 SMART arm_5 403 443 IPR000225 GO:0005515
Pvu8g0463 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 586 628 IPR000225 GO:0005515
Pvu8g0463 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 496 541 IPR000225 GO:0005515
Pvu8g0463 903 Pfam Armadillo/beta-catenin-like repeat 539 570 IPR000225 GO:0005515
Pvu8g0463 903 Pfam Armadillo/beta-catenin-like repeat 408 442 IPR000225 GO:0005515
Pvu8g0463 903 Pfam Armadillo/beta-catenin-like repeat 487 528 IPR000225 GO:0005515
Pvu8g0463 903 Pfam Armadillo/beta-catenin-like repeat 578 614 IPR000225 GO:0005515
Pvu8g0463 903 Pfam Armadillo/beta-catenin-like repeat 449 483 IPR000225 GO:0005515
Pvu8g0463 903 Pfam Armadillo/beta-catenin-like repeat 616 658 IPR000225 GO:0005515
Pvu8g0463 903 Pfam Armadillo/beta-catenin-like repeat 663 699 IPR000225 GO:0005515
Pvu8g0463 903 PANTHER PROTEIN ARABIDILLO 1 15 898 IPR044583 -
Pvu8g0463 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 414 456 IPR000225 GO:0005515
Pvu8g0463 903 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 671 713 IPR000225 GO:0005515
Pvu8g0463 903 Gene3D - 490 576 IPR011989 -
Pvu8g0463 903 Gene3D - 577 664 IPR011989 -
Pvu8g0463 903 Gene3D - 665 749 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0463 557 744 U-box Gene Family AT2G23140 34.921 1.41e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0463 - - gmx:100819086 1590.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0463 8 3952316 3966900 Pvu8g0463 8 3952316 3966900 ECH