Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0459 TCAGCGTCTACACCATCGCAGCTTCAATTGGAAGCAAACGCTATAATCAATAGTGGATGGTGGAATCTGTCGTCATTATATTCACATCATATCTGTTCATTGAATCGTGGTATACTTTGCAATGATGCTGGAAGTGTAATTGGTATCACATATCCGTGTTTCGAAGGAGCGGTTCAATTAGCAACACTAAACCTCTCTGCTTTCAAGAATTTAGAATCCTTCGAGGTCTCCAGCTGTCTAGAAGGGACTATCCCACCTGAAATTGGTAGTCTTTCCAAACTCACTGTTATTCGTTTATTCTCCAATGCTCTTAAAGGTGAAATACCTTTCACAATAGGAAATATTTCCAAACTTGTTGTTCTTGATTTATCTCATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACTGGTCTTGATTTATCTCATAATTCTCTTCAAGGTGAAATACCTTCCACAATAGGAAATCTTTCCAAACTCAGTGGTCTTGATTTATCTCATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACTGGTCTTGATTTATCTCATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACTGGTCTTGATTTATCTCATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTTCAAACTCAGTAGTCTTGATTTATCTCATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTTCAAACTCATTGGTCTTGATTTATCCCACAATTCTCTTCAAGGTGAAATACCTACCACAATAAGAAATCTAACACAATTATGGAGCCTAGAAATCTCTAACAACTACATTGAAGGCTCCATTCCTTTTGAATTGTCATTCTTGAAAAATCTTGATTTTGTAAATCTATCTTACAATAAAATCAATGGAACCTTGTTCCTTTCACTTTCAAACCTTATGAACCTTCAAATTCTAGACATTTCACATAATCTACTCATTGGTTCCCTAAAACTCTTCTCGAATAGAGATTTTTCAATCTTAAAAAGTCTAGACCTAAGCTACAATAATTTTACTGGTCCACCTCTATTTTTGAATGCCTACAATGTGAACCTTTCCTTCAATAATCTGAAAGGTCCCATACCAAACGGTTTAATTCCAGATGCGTTAAAAGGAAACAAGGGTGAAAAACATGCAAGGTTAACAAAAATATCTAAGAACGGGGACTTGTTCTGTATATGGAACTATGATGGAAGCATAGCCTATGAAGACATCATTACAACAACGGAAGACTTTGACCTCAAATATTGTATCGGAACAGGTGCATACGGGAGTGTTTATAGGGCTCAACTACCAAGTGGCAAGATTGTTGCGGTGAAAAAACTCCATGGCTTTGAAGCAGAGGTCCCCACATTTGATGAGAGTTTCAGAAACGAAGCCAAAGTATTGTCAGAAATAAAGCATCGACATATCGTTAAGCTCCACGGATTCTGCTTGCACAAAAGAATCATGTTTTTGATATATGAGTACATGGAGAAAGGAAGCTTGTTTTCTGTCTTGTTTGATGACATAGAAGCAATGGAATTGGATTGGAAAAAGAGGGTTAACACAGTAAAAGGCACTGCACATGCTCTTTCATATCTTCATCATGATTGTGTCCCTCCAATAGTGCATAGAGATATATCAACAAGCAACGTGTTGCTTAACTCCAATTGGGAGCCTACTGTTTCTGACTTTGGCACAGCTCGATTTCTCAATCTTGATTCATCCAATCAAACTATAGTTGCTGGAACCATTGGATACATAGCTCCAGAGCTTGCGTATACAATGGTTGTGAATGAAAAGTGTGATGTGTATAGCTTCGGAGTGGTGGCGTTAGAAACCTTGATGGGAAAACATCCAAAGGAAATACTCTCATCACTTCAATCAACTTCTACAGATGATGACATCAAATTATGTGAAATATTGGACCAACGCCTCCCACACCCAACATATTCAATTTTACAAGACATAATTGTCATTGCCATTGTGACTTTTGCGTGCTTAAATCCCAACCCTTGCTCTCGCCCAACAATGAAAAACATTTCTCATATTTTTCTTAATAAACCTAAACATTTAATAACTAGGTCTTACTTTGAGGTGATGAAAATAGAATTGTATAAGAGAGTGATGTCTTACAAAACACAACTGTGA 2226 0.3643 SASTPSQLQLEANAIINSGWWNLSSLYSHHICSLNRGILCNDAGSVIGITYPCFEGAVQLATLNLSAFKNLESFEVSSCLEGTIPPEIGSLSKLTVIRLFSNALKGEIPFTIGNISKLVVLDLSHNSLQGEIPFTIGNLSKLTGLDLSHNSLQGEIPSTIGNLSKLSGLDLSHNSLQGEIPFTIGNLSKLTGLDLSHNSLQGEIPFTIGNLSKLTGLDLSHNSLQGEIPFTIGNLFKLSSLDLSHNSLQGEIPFTIGNLFKLIGLDLSHNSLQGEIPTTIRNLTQLWSLEISNNYIEGSIPFELSFLKNLDFVNLSYNKINGTLFLSLSNLMNLQILDISHNLLIGSLKLFSNRDFSILKSLDLSYNNFTGPPLFLNAYNVNLSFNNLKGPIPNGLIPDALKGNKGEKHARLTKISKNGDLFCIWNYDGSIAYEDIITTTEDFDLKYCIGTGAYGSVYRAQLPSGKIVAVKKLHGFEAEVPTFDESFRNEAKVLSEIKHRHIVKLHGFCLHKRIMFLIYEYMEKGSLFSVLFDDIEAMELDWKKRVNTVKGTAHALSYLHHDCVPPIVHRDISTSNVLLNSNWEPTVSDFGTARFLNLDSSNQTIVAGTIGYIAPELAYTMVVNEKCDVYSFGVVALETLMGKHPKEILSSLQSTSTDDDIKLCEILDQRLPHPTYSILQDIIVIAIVTFACLNPNPCSRPTMKNISHIFLNKPKHLITRSYFEVMKIELYKRVMSYKTQL* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0459 741 PRINTS Leucine-rich repeat signature 238 251 - -
Pvu8g0459 741 PRINTS Leucine-rich repeat signature 331 344 - -
Pvu8g0459 741 Gene3D Transferase(Phosphotransferase) domain 1 522 720 - -
Pvu8g0459 741 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 407 714 - -
Pvu8g0459 741 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 238 - -
Pvu8g0459 741 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 232 396 - -
Pvu8g0459 741 Gene3D Phosphorylase Kinase; domain 1 406 521 - -
Pvu8g0459 741 Gene3D Ribonuclease Inhibitor 188 405 IPR032675 -
Pvu8g0459 741 SUPERFAMILY L domain-like 64 398 - -
Pvu8g0459 741 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 232 396 - -
Pvu8g0459 741 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 407 714 - -
Pvu8g0459 741 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 238 - -
Pvu8g0459 741 ProSitePatterns Tyrosine protein kinases specific active-site signature. 567 579 IPR008266 GO:0004672|GO:0006468
Pvu8g0459 741 Gene3D Ribonuclease Inhibitor 6 183 IPR032675 -
Pvu8g0459 741 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Pvu8g0459 741 Pfam Leucine rich repeat 237 296 IPR001611 GO:0005515
Pvu8g0459 741 ProSitePatterns Protein kinases ATP-binding region signature. 449 472 IPR017441 GO:0005524
Pvu8g0459 741 Pfam Protein kinase domain 448 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0459 741 SMART LRR_sd22_2 187 213 - -
Pvu8g0459 741 SMART LRR_sd22_2 331 356 - -
Pvu8g0459 741 SMART LRR_sd22_2 139 165 - -
Pvu8g0459 741 SMART LRR_sd22_2 259 285 - -
Pvu8g0459 741 SUPERFAMILY Protein kinase-like (PK-like) 426 708 IPR011009 -
Pvu8g0459 741 ProSiteProfiles Protein kinase domain profile. 443 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0459 Pvu-Chr8 3920891 3925188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0459 80 615 Receptor kinase-like Gene Family AT4G08850 39.048 6.61e-122 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g0459 Pkinase 5.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0459 - - var:108327179 932.554