Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0454 ATGACAATGATGCAGTTTTTGGATTCCAATTTCCATGGTATGTTCTTTATTCTTATTTACGTTTTGCTTTTTCTGAGCTCTGTTTTGGAGTTAGGATCAGCGTCTACACCATCGCAGCTTCAATTGGAAGCAAACGCTATAATCAATAGTGGATGGTGGAATCTCTCTTCTTCAGATTCACATCATATTTGTTCATTGAATCATGGTATACATTGCAATGTTGTTGGAAGTGTAATTGGTATCAAATATCAGTGTTCCGAAGGACGGATTCAATTAGCAACACTAAACCTCTCGGTTTTCAAGAATTTAGAATCCTTTGAGGTCACCCATTGTAGTCTACATGGCACTATCCCACCTGAAATAGGAAATCTTCTCAAACTTACTCATCTTGATTTTTGTTATAATTCTCTAAGTGGAAATCTTTCAAAACTTACTATTTTTGATTTATCCTACAATTCTCTTGAAGGTAAAATACCTCCTACAATTGGAAATCTTTCCAAACTTTTTCATCTTGATTTATCCCACAATTCTTTCCATGGGGAGATACCTCCTACAATAGGAAATCTTTCAAATCTCACTTATCTTCATTTATCCTTCAATACTCTTCAAGGTGAAATACCTCCCACAATTGGAAATCTAACCCAACTATGGAGCCTGGTAATCTCTAACAACTATATTGAAGGCTTCATTCCTTTTGAATTGTCATTCTTGCGAAATCTTGTTTTTGTAAATCTATCTTACAATAAAATCAATGGAACCTTGTTCCTTTCACTTTCAAACCTTAGGAACCTTAAAAATCTAGACATTTCACACAATCTACTCACTGGTCCCCTAAAACCCTTCTCAGTACAAGATTTTCCATCCTTAGAAAGTTTGAACCTAAGCTACAATAATCTTATCGGTCTACCTCTACTTTTGAATGCCTATAAAGTGGACCTTTCCTTCAATAATTTGAAGGGTCCCATTCCAGATGGTTTAAATCCATATGTGCTAAAAGGGAACAAAGGCGTATGCAGTGACATTTTACATGTACAAACGGAATACCAATTCCAACCTTGTTTAGTCCGCCACAAGAAACTAACCCAAAGTCAGAATCGGTTGATCATAATTCTTTCTGTCACCATTTTTCTAATCATGATCTTCTCTAAACTTCTATTTCTAAGACACAATCGCACTGTAGTCAAGAACAAAGATGCAAGGTTAACAAAAATATCTAAGAATGGGGACTTGTTTTGCATATGGAACTATGACGGAAGCATAGCCTATGAAGACATCATTACAGCAACTGAAGACTTTGACCTCAAATATTGTATCGGAACAGGTGCATACGGGTGTGTTTATAGGGCTCAACTACCAAGTGGCAAGATTGTTGCTGTGAAAAAACTCCACGGCTTTGATGCAACGCATCGACATATCGTCAAGCTCCATGGATTTTGTTTGCACAAAAGAATCATGTTTTTGATCTATGAGTACATGGAGAAAGGAAGCTTGTTTTCTGTCTTGTATGATGACATGGAAGCAATGGAATTCGATTGGAAAAGGAGGGTTAACACAATGAAAGGCATTGCACATGCTCTCTCATATCTTCATCATGATTGTGTCCCTCCAATAGTGCATAGAGACATATCAGCATGCAATGTGTTACTTAACTCCAACTGGGAGCCTACTGTTTCTGACTTTGGCATATCTCGATTTCTGAACCTTGATTCATCCAATCGAACTATAGTTGCTGGAACCATTGGATACATAGCTCCAGAGCTTGCGTATACAATGGTTGTGAATGAAAAGTGTGATGTGTATAGCTTCGGAGTGGTGGCGCTGGAAACTTTGATGGGAAAACATCCTAAGGATATACTCTCATCACTTCAATCAACTTCTACAATATGTGAAATATTGGACCAACGTCTCCCACACCCAACCGTTTCAGTTTTACAAGACATAGTTGTTGTTGCCATTGTGGCCTTTGCGTGCTTAAATCCAAATCCTTGCTCTCGCCCAACAATGAAATGCATCTCTCAATGTTTTCTTACTCGACTCACACCATTCAACATTCCTTTACATCATATTTCATTACAGCAGCTCAGGAGTCGAGAACTCACCCACTACTTAAAATTGTGA 2118 0.3772 MTMMQFLDSNFHGMFFILIYVLLFLSSVLELGSASTPSQLQLEANAIINSGWWNLSSSDSHHICSLNHGIHCNVVGSVIGIKYQCSEGRIQLATLNLSVFKNLESFEVTHCSLHGTIPPEIGNLLKLTHLDFCYNSLSGNLSKLTIFDLSYNSLEGKIPPTIGNLSKLFHLDLSHNSFHGEIPPTIGNLSNLTYLHLSFNTLQGEIPPTIGNLTQLWSLVISNNYIEGFIPFELSFLRNLVFVNLSYNKINGTLFLSLSNLRNLKNLDISHNLLTGPLKPFSVQDFPSLESLNLSYNNLIGLPLLLNAYKVDLSFNNLKGPIPDGLNPYVLKGNKGVCSDILHVQTEYQFQPCLVRHKKLTQSQNRLIIILSVTIFLIMIFSKLLFLRHNRTVVKNKDARLTKISKNGDLFCIWNYDGSIAYEDIITATEDFDLKYCIGTGAYGCVYRAQLPSGKIVAVKKLHGFDATHRHIVKLHGFCLHKRIMFLIYEYMEKGSLFSVLYDDMEAMEFDWKRRVNTMKGIAHALSYLHHDCVPPIVHRDISACNVLLNSNWEPTVSDFGISRFLNLDSSNRTIVAGTIGYIAPELAYTMVVNEKCDVYSFGVVALETLMGKHPKDILSSLQSTSTICEILDQRLPHPTVSVLQDIVVVAIVAFACLNPNPCSRPTMKCISQCFLTRLTPFNIPLHHISLQQLRSRELTHYLKL* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0454 705 Gene3D Transferase(Phosphotransferase) domain 1 493 680 - -
Pvu8g0454 705 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 36 301 - -
Pvu8g0454 705 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 263 701 - -
Pvu8g0454 705 Gene3D Ribonuclease Inhibitor 232 347 IPR032675 -
Pvu8g0454 705 Gene3D Ribonuclease Inhibitor 38 140 IPR032675 -
Pvu8g0454 705 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Pvu8g0454 705 Pfam Leucine Rich Repeat 167 189 IPR001611 GO:0005515
Pvu8g0454 705 ProSiteProfiles Leucine-rich repeat profile. 288 309 IPR001611 GO:0005515
Pvu8g0454 705 ProSitePatterns Tyrosine protein kinases specific active-site signature. 537 549 IPR008266 GO:0004672|GO:0006468
Pvu8g0454 705 ProSitePatterns Protein kinases ATP-binding region signature. 438 461 IPR017441 GO:0005524
Pvu8g0454 705 Gene3D Phosphorylase Kinase; domain 1 467 492 - -
Pvu8g0454 705 SUPERFAMILY Protein kinase-like (PK-like) 415 674 IPR011009 -
Pvu8g0454 705 Pfam Leucine rich repeat 190 250 IPR001611 GO:0005515
Pvu8g0454 705 Gene3D Ribonuclease Inhibitor 141 231 IPR032675 -
Pvu8g0454 705 ProSiteProfiles Protein kinase domain profile. 432 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0454 705 Pfam Protein tyrosine and serine/threonine kinase 467 674 IPR001245 GO:0004672|GO:0006468
Pvu8g0454 705 Gene3D Phosphorylase Kinase; domain 1 417 466 - -
Pvu8g0454 705 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 36 301 - -
Pvu8g0454 705 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 263 701 - -
Pvu8g0454 705 SUPERFAMILY L domain-like 97 326 - -
Pvu8g0454 705 SMART LRR_typ_2 189 213 IPR003591 -
Pvu8g0454 705 SMART LRR_typ_2 141 165 IPR003591 -
Pvu8g0454 705 SMART LRR_typ_2 286 309 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0454 Pvu-Chr8 3864264 3866839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0454 94 585 Receptor kinase-like Gene Family AT4G08850 37.905 7.40e-103 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g0454 PK_Tyr_Ser-Thr 2.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0454 - - pvu:PHAVU_008G044400g 1109.75