Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0453 ATGTTAGGATCAGCGTCTACATCATCGCAGCTTCAATTGGAAGCAAACGCTATAATCAATAGTGGATGGTGGAATCTCTCCTCCTCAGATTCACATCATATTTGTTCATTGAATCATGGTATACATTGCAATGCTGTTGGAAGTAATTTAGAATCCTTTGAGGTCGTCTATTGTAGTTTACACGGCACTATCCCACCTGAAATAGGAAATCTTCCCAAACTTACTCATCTTGATTTTTGTTATAATTCTCTTAGTGGTAAAATACCTTTCACGATGGGAAATCTTTTAGAACTCACTTATCTTCATTTTTCTCACAATTCACTTTATGGGGAGATACCTTCTACAATAGGAAATCTTTCTAAACTCAATGATCTTGATTTATCCTACAACTCTTTTCAAGGTGAAATACCTTCCACAATAGGAAATCTTTCAAAACTTACTATTCTTGATTTATCCTACAATTCTCTTGAAGGTGAAATACCTCTTACAATTGGAAATCTTTCAAAACTTTTTTATCTTGATTTATCCCACAATTCTTTTCATGGGGAGATACCTCCTACAATAGGAAATCTTTCCAATCTCACTCATCTTCATTTATCCTCTAATACTCTTCAAGGTGAAATACCTCCCACAGTTGGAAATCTAACCCAACTATGGAGCCTGGCAATCTCTAACAACTACATTGAAGGTCCCATTTTTTTTGAATTGTCATTCCTGCAAAATCTTAATGTTGCAAATCTATCTTACAATAAAATCAATGGAACATTGCCCCTTTTGCTTTCAAACCTTAGGAACCTTAAAAATCTTGACATTTCACACAATCTACTCACTGGCTCCCTAAAACCCTTCTCAGTACAAGATTTTCCATCCTTAGAAAGTCTGGACCTAAGCTACAATAATCTTACCGGTCTACCTTTACTTTTGAATGCCTATAATATGGACCTTTCCTTCAATAATTTGAAGGGTCCCATTCCAAATGGTTTAAATCCATATGTGCTAAAAGGGAACAAAGGCGTATGCAGTGACATTTTACATGTACAAACGGAATACCAATTCCACCCTTGTTTAGTCCGCCACAGGAAACTAACCAAGAATCAGAATCGGTTGGTCATAATTTTTTCTGTCACCATTTTTCTAATTATGATCTTCTCTAAACTTCTATATCTGAGACACAATCGCACTGTAGTCAAGAACAAAGATGCAAGGTTAACAAAAATATCTAAGAATGGGGACTTGTTCTGCATATGGAACTATGACGGAAGCATAGCCTATGAAGACATCATTATAGCAACTGAAGACTTTGACCTCAAATATTGTATCGGAACAGGTGCATACGGGTGTGTTTATAGGGCTCAACTACCAAGTGGAAAGATTGTTGCGGTGAAAAAACTCCACGGCTTTGATGCAACGGTCTCCACATTTGATGAGAGTTTCAGAAACGAAGCCAAAGTATTGTCAGAAATAAAGCACCGACTTATCGTCAAGCTCCATGGATTTTGTTTGCACAAAAGAATCATGTTTTTGATCTATGAGTACATGGAGAAAGGAAGCTTGTTTTCTGTCTTGTATGATGACATGGAAGCAATGGAATTCGATTGGAAAAAGAGGGTTAACACAGTGAAAGGCATTGCACATGCTCTCTCATATCTTCATCATGATTGTGTCCCTCCAATAGTGCATAGAGACATATCAGCATGCAATGTGTTACTTAACTCCAACTGGGAGCCTACTGTTTCTGACTTTGGCATAGCTCGATTTCTGAACCTTGATTCATCCAATCGAACTATAGTTGCTGGAACCATTGGATACATAGCTCCAGAGCTTGCATATACAATGGTTGTGAATGAAAAGTGTGATGTGTATAGCTTTGGAGTGGTGGCGCTGGAAACTTTGATGGGAAAACATCCTAAGGATATACTCTCATCACTTCAATCAACTTCTACAGTATGTGAAATATTGGACCAACGTCTTCCACACCCAACAGTTTCAGTTTTACAAGACATAGTTGTTGTTGCCATTGTGGCCTATGCGTGCTTAAATCCCAATCCTTGCTCTCGCCCAACAATGAAATGCATCTCTCAATGTTTTCTTACTCGGCTCACACCAATTAACATTCCTTTACATCATATTTCATTGCAGCAGCTCATGAGTCGAGAACTCACC 2163 0.3786 MLGSASTSSQLQLEANAIINSGWWNLSSSDSHHICSLNHGIHCNAVGSNLESFEVVYCSLHGTIPPEIGNLPKLTHLDFCYNSLSGKIPFTMGNLLELTYLHFSHNSLYGEIPSTIGNLSKLNDLDLSYNSFQGEIPSTIGNLSKLTILDLSYNSLEGEIPLTIGNLSKLFYLDLSHNSFHGEIPPTIGNLSNLTHLHLSSNTLQGEIPPTVGNLTQLWSLAISNNYIEGPIFFELSFLQNLNVANLSYNKINGTLPLLLSNLRNLKNLDISHNLLTGSLKPFSVQDFPSLESLDLSYNNLTGLPLLLNAYNMDLSFNNLKGPIPNGLNPYVLKGNKGVCSDILHVQTEYQFHPCLVRHRKLTKNQNRLVIIFSVTIFLIMIFSKLLYLRHNRTVVKNKDARLTKISKNGDLFCIWNYDGSIAYEDIIIATEDFDLKYCIGTGAYGCVYRAQLPSGKIVAVKKLHGFDATVSTFDESFRNEAKVLSEIKHRLIVKLHGFCLHKRIMFLIYEYMEKGSLFSVLYDDMEAMEFDWKKRVNTVKGIAHALSYLHHDCVPPIVHRDISACNVLLNSNWEPTVSDFGIARFLNLDSSNRTIVAGTIGYIAPELAYTMVVNEKCDVYSFGVVALETLMGKHPKDILSSLQSTSTVCEILDQRLPHPTVSVLQDIVVVAIVAYACLNPNPCSRPTMKCISQCFLTRLTPINIPLHHISLQQLMSRELT 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0453 721 ProSiteProfiles Protein kinase domain profile. 434 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0453 721 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 720 - -
Pvu8g0453 721 SMART LRR_typ_2 95 119 IPR003591 -
Pvu8g0453 721 SMART LRR_typ_2 143 167 IPR003591 -
Pvu8g0453 721 SMART LRR_typ_2 288 311 IPR003591 -
Pvu8g0453 721 SMART LRR_typ_2 191 215 IPR003591 -
Pvu8g0453 721 SMART LRR_typ_2 263 287 IPR003591 -
Pvu8g0453 721 Gene3D Ribonuclease Inhibitor 1 350 IPR032675 -
Pvu8g0453 721 ProSiteProfiles Leucine-rich repeat profile. 290 311 IPR001611 GO:0005515
Pvu8g0453 721 SMART LRR_sd22_2 95 121 - -
Pvu8g0453 721 SMART LRR_sd22_2 191 217 - -
Pvu8g0453 721 SMART LRR_sd22_2 143 169 - -
Pvu8g0453 721 SMART LRR_sd22_2 263 296 - -
Pvu8g0453 721 Gene3D Transferase(Phosphotransferase) domain 1 513 702 - -
Pvu8g0453 721 ProSitePatterns Protein kinases ATP-binding region signature. 440 463 IPR017441 GO:0005524
Pvu8g0453 721 Pfam Leucine Rich Repeat 193 215 IPR001611 GO:0005515
Pvu8g0453 721 Pfam Protein kinase domain 439 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0453 721 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 720 - -
Pvu8g0453 721 Pfam Leucine rich repeat 121 179 IPR001611 GO:0005515
Pvu8g0453 721 Pfam Leucine rich repeat 264 304 IPR001611 GO:0005515
Pvu8g0453 721 SUPERFAMILY Protein kinase-like (PK-like) 417 694 IPR011009 -
Pvu8g0453 721 PRINTS Leucine-rich repeat signature 146 159 - -
Pvu8g0453 721 PRINTS Leucine-rich repeat signature 288 301 - -
Pvu8g0453 721 ProSitePatterns Tyrosine protein kinases specific active-site signature. 558 570 IPR008266 GO:0004672|GO:0006468
Pvu8g0453 721 Coils Coil 720 721 - -
Pvu8g0453 721 SUPERFAMILY L domain-like 35 372 - -
Pvu8g0453 721 Gene3D Phosphorylase Kinase; domain 1 395 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0453 Pvu-Chr8 3859501 3861955 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0453 47 606 Receptor kinase-like Gene Family AT4G08850 39.543 6.24e-119 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g0453 Pkinase 3.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0453 - - pvu:PHAVU_008G044400g 1040.8