Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0451 ATGCACTTTTTTAATTCCAATTTCTATGGTATGTCCTTTCTTCTTATTTATGTTTTGCTTTTTTTGAGCTCTGTTTGGGAGTTAGGATCCGCGTCTACACCATCGCAGCTTCAATTGGAAGCAAACGCTATAATCAATAGTGGATGGTGGAATCTCTCCTCCTCAGATTCACATAATATCTGTTCATTGATTCATGGTATACATTGCAATGATGATGGAAGTGTAATTCGTATCAAATATTTGTGTTTCAAAGGACGGATTCAATTAGCAACACTAAACCTCTCTGCTTTCAAGAATTTAGAATTCTTTGAGGTCGCCTACTGTCTAGGAGGGACTATTCCACCTGAAATTGGTACTCTTTCCAAACTCACTTATCTTGAATTATCCTTCAATGCTCTCCAAGGTGAAATACCTTTCTCAATAGGAAGTCTTTCTAAACTTATTTTTCTTGATCTATCCCACAATTCTCTTCATGACGAAATACCTTTTACAATAGAAAATCTTTCCAAACTCACTCATCTTAATTTATACCACAATTCTCTTCAAGGTAAAATACCTTCCACAATAGGAAACATTTCCAAACTCACTTATCTTGATTTATCATACAATTCTCTTCAAGGTGAAATACCTAGCACAATAAAAAATCTAACTCAACTATGGAGCCTAGTAATCTCTAATAACTACATAGAAGGCTCCATTCCTTTTGAATTGTCATTCTTGCGAAATCTTAGTGATGTAGATCTATCTTACAATAAAATCAATGGAACCTTATCCTTTTCACTTTCAAACCTCACCAACCTTCAAAATCTAGATGTTTCACATAATCTACTCACCGATTCCCTAAAACCCTTCGCAGGAAGAGATTTTTCATTCTTAGAAAGTCTAGATCTAAGCTACAATAATCTTACCGGTCTGCCTCTAGTTTTGAATTCCCATGATGTGGACATTTCCTTCAATAATTTGAAGGGTTCCATTCCAGAAGGTTTAAATCCATATGCGCTAAAAGGAAACAAGGGTGTATGCAGTGACAATTTAAATATACAAATAAAATACCAATTTCAACCTTGTTCAGTCCGCCACAAGAAACTAACACTAAATTGGAATCATAATCAGAATCAGTTGGTCATAATTCTTTTGATCACCATTTTTTTAACCATGGCCTTCATACTATATTTATATACGAGGCTCAATCGTGTTGCAATAAAGAAAAAACATGCAAGGTTAACAGAAACGTCTAAGAATGGGGACTTGTTCTGCATATGGAACTATGACGGAAGCATAGCCTATGAAGACATCATTACAGCAACTGAAGACTTTGACATCAAATATTGTATCGGAACAGGTGCGTACGGGAGTGTTTATAGGGCTGAACTACCAAGTGGTAAGATTGTTGCAGTGAAAAAACTCCATGGCTTTGAAGCAGAGGTCCCCACATTTGATGGGAGTTTCAAAAACGAAGTCAAAGTATTGTCAGAAATAAAACACCGACATATCGTCAAGCTCCACGGATTCTACTTTCACAAAAGAATTGTGTTTTTGATCTATGAGTACATGGAAAAAGGAAGCATGCTTTCTATCTTGTTTGATGACATGGGAGCAATGGAATTGGATTGGATAAAGAGGGTTAACACCGTGAAAGGCACTGCACATGCTCTCTCATATCTTCATCATGATTGTGTCCCTCCAATAGTGCATAGAGACGTATCAACAAGCAATGTTTTGCTTAACTCCAATTGGGAACCTACTGTTTCTGACTTTGGTACAGCTCGATTTCTGAACCTTGATTCATCCAATCAAACTATAGTTGTTGGAACCATTGGATACATAGCTCCAGAGCTTGCGTATACAACGGTTGTGAATGAAAAGTGTGATGTGTATAGTTTCGGAGTGGTGGCACTGGAAACTTTGATGGGAAAACATCCTAAGAATATACTCTCATCACTTCAAACAACTTCTACAGTATGTGAAATATTGGACCAACGTCTTCCACACCCAACCGTTTCAGTTTTACAAGACATAGTTGTTGTTGCCATTGTGGCCTTTGCATGCTTAAATCCAAATCCTTGCTCTCGTCCAACAATGAAATGCATCTCTCAATGTTTTCTTACTCGGCTCACACCATTCAACATTCCTTTACATCATATTTCATTGCAGCAACTTATGAGTCAAGAACTCACTCACTACTTAAAATTGTGA 2196 0.3693 MHFFNSNFYGMSFLLIYVLLFLSSVWELGSASTPSQLQLEANAIINSGWWNLSSSDSHNICSLIHGIHCNDDGSVIRIKYLCFKGRIQLATLNLSAFKNLEFFEVAYCLGGTIPPEIGTLSKLTYLELSFNALQGEIPFSIGSLSKLIFLDLSHNSLHDEIPFTIENLSKLTHLNLYHNSLQGKIPSTIGNISKLTYLDLSYNSLQGEIPSTIKNLTQLWSLVISNNYIEGSIPFELSFLRNLSDVDLSYNKINGTLSFSLSNLTNLQNLDVSHNLLTDSLKPFAGRDFSFLESLDLSYNNLTGLPLVLNSHDVDISFNNLKGSIPEGLNPYALKGNKGVCSDNLNIQIKYQFQPCSVRHKKLTLNWNHNQNQLVIILLITIFLTMAFILYLYTRLNRVAIKKKHARLTETSKNGDLFCIWNYDGSIAYEDIITATEDFDIKYCIGTGAYGSVYRAELPSGKIVAVKKLHGFEAEVPTFDGSFKNEVKVLSEIKHRHIVKLHGFYFHKRIVFLIYEYMEKGSMLSILFDDMGAMELDWIKRVNTVKGTAHALSYLHHDCVPPIVHRDVSTSNVLLNSNWEPTVSDFGTARFLNLDSSNQTIVVGTIGYIAPELAYTTVVNEKCDVYSFGVVALETLMGKHPKNILSSLQTTSTVCEILDQRLPHPTVSVLQDIVVVAIVAFACLNPNPCSRPTMKCISQCFLTRLTPFNIPLHHISLQQLMSQELTHYLKL* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0451 731 Gene3D Ribonuclease Inhibitor 25 351 IPR032675 -
Pvu8g0451 731 ProSitePatterns Tyrosine protein kinases specific active-site signature. 563 575 IPR008266 GO:0004672|GO:0006468
Pvu8g0451 731 SUPERFAMILY L domain-like 60 311 - -
Pvu8g0451 731 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 33 304 - -
Pvu8g0451 731 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 266 727 - -
Pvu8g0451 731 Gene3D Transferase(Phosphotransferase) domain 1 518 706 - -
Pvu8g0451 731 ProSitePatterns Protein kinases ATP-binding region signature. 445 468 IPR017441 GO:0005524
Pvu8g0451 731 Pfam Protein kinase domain 443 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0451 731 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Pvu8g0451 731 ProSiteProfiles Protein kinase domain profile. 439 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0451 731 SMART LRR_typ_2 264 288 IPR003591 -
Pvu8g0451 731 SMART LRR_typ_2 120 144 IPR003591 -
Pvu8g0451 731 SMART LRR_typ_2 168 192 IPR003591 -
Pvu8g0451 731 SMART LRR_typ_2 289 312 IPR003591 -
Pvu8g0451 731 SMART LRR_typ_2 240 263 IPR003591 -
Pvu8g0451 731 SUPERFAMILY Protein kinase-like (PK-like) 422 700 IPR011009 -
Pvu8g0451 731 Pfam Leucine Rich repeat 291 304 IPR001611 GO:0005515
Pvu8g0451 731 PRINTS Leucine-rich repeat signature 195 208 - -
Pvu8g0451 731 PRINTS Leucine-rich repeat signature 264 277 - -
Pvu8g0451 731 SMART LRR_sd22_2 240 263 - -
Pvu8g0451 731 SMART LRR_sd22_2 264 286 - -
Pvu8g0451 731 SMART LRR_sd22_2 192 218 - -
Pvu8g0451 731 SMART LRR_sd22_2 120 135 - -
Pvu8g0451 731 SMART LRR_sd22_2 144 170 - -
Pvu8g0451 731 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 266 727 - -
Pvu8g0451 731 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 33 304 - -
Pvu8g0451 731 ProSiteProfiles Leucine-rich repeat profile. 291 312 IPR001611 GO:0005515
Pvu8g0451 731 Gene3D Phosphorylase Kinase; domain 1 399 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0451 Pvu-Chr8 3846761 3849178 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0451 71 611 Receptor kinase-like Gene Family AT4G08850 38.559 1.74e-110 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu8g0451 Pkinase 6.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0451 - - pvu:PHAVU_008G044400g 1455.65