Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0446 ATGGGGCTTGGGAATAATGCAATTCAGGCAGGGAGTTTGGATGTGGGTAAGTCAAAGGTAAAGATGCAAAAGGCTGGTGCAGAAAAGGAAATTGGGTGCTGTGTTAAATTCTGTTTCATTGGGAGCTGTATACCTTCAAGATCAAAGGTTGATACTTCCATCAGTGGCACTAGTGCTAACAGTGTGGAAAAAACTTCTGCTTGTGAGAAAAACAAGAAGGAAACCAATGCTCTTCCAGGGTCCTCTACAACAACCAGTAATGCAGAAAGTATCCCTTCCACCCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTTACATTCAATGAGCTTAAGTTGGCCACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGATTTGGATGTGTTTTCAAGGGTTGGATTGAAGAAAATGGTACTGCACCTGTGAAACCTGGTACTGGGCTTACTGTAGCAGTGAAAACTCTCAACCATGATGGGCTTCAGGGTCACAAAGAGTGGCTTGCAGAGTTAGACATTCTTGGTGACCTCGTCCATCCGAATCTGGTCAAATTGGTTGGTTTCTGTATTGAAGATGACCAAAGATTGTTGGTGTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAAAAGGGTCGTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTTCTTTTCTCCATGAAGAAGCTCAGCGGCCTGTAATCTATCGTGATTTTAAGACATCTAATATTCTGTTAGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTAGCCAAAGATGGTCCTGAAGGGGAAAAGACACACATATCAACGAGAGTCATGGGAACATATGGTTATGCAGCTCCCGAGTATGTGATGACTGGGCATTTGACATCAAAAAGTGATGTCTATAGTTTTGGAGTGGTGCTACTAGAAATGCTGACTGGCCGGCGATCCATCGATAAGAATAGACCAAATGGGGAACACAATCTTGTGGAGTGGGCAAGACCTGTACTTGGGGACCGGAGGATGATACTACGGATTATTGATCCTCGGCTTGAAGGTCACTTCTCTGTTAAAGGGTCACAGAAGGCTGCCCAGTTGGCTGCTCAATGCCTTTGCCGTGATCCAAAATCCAGACCTATGATGAGTGATGTTGTTCAAGCTCTGAAGCATTTGCAAAACCTTAAGGATATGGCTATCTCAACTTATCATTTCCAGGTTGCCCGAGTAGATCGAACCATGTCCATGCCAACTTCTAAAAATGGTATGCAAGCACAGATAACAATATCAAAAAAGGGTCAACCTGCAAGGTCCTTGTCAAGTCCAAAAGGTCCTCATGGTTCTCCATATCATCATTATATCAAGTCACCAAAACCTAATGGATAA 1428 0.4349 MGLGNNAIQAGSLDVGKSKVKMQKAGAEKEIGCCVKFCFIGSCIPSRSKVDTSISGTSANSVEKTSACEKNKKETNALPGSSTTTSNAESIPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELDILGDLVHPNLVKLVGFCIEDDQRLLVYECMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLSFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPVLGDRRMILRIIDPRLEGHFSVKGSQKAAQLAAQCLCRDPKSRPMMSDVVQALKHLQNLKDMAISTYHFQVARVDRTMSMPTSKNGMQAQITISKKGQPARSLSSPKGPHGSPYHHYIKSPKPNG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0446 475 MobiDBLite consensus disorder prediction 61 95 - -
Pvu8g0446 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Pvu8g0446 475 PANTHER RECEPTOR-LIKE KINASE PLANT 57 467 - -
Pvu8g0446 475 Pfam Protein kinase domain 125 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0446 475 ProSitePatterns Protein kinases ATP-binding region signature. 128 160 IPR017441 GO:0005524
Pvu8g0446 475 Gene3D Phosphorylase Kinase; domain 1 102 207 - -
Pvu8g0446 475 MobiDBLite consensus disorder prediction 442 475 - -
Pvu8g0446 475 ProSiteProfiles Protein kinase domain profile. 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0446 475 Gene3D Transferase(Phosphotransferase) domain 1 208 426 - -
Pvu8g0446 475 MobiDBLite consensus disorder prediction 75 95 - -
Pvu8g0446 475 CDD STKc_IRAK 128 406 - -
Pvu8g0446 475 SUPERFAMILY Protein kinase-like (PK-like) 96 403 IPR011009 -
Pvu8g0446 475 PANTHER OS01G0588500 PROTEIN-RELATED 57 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0446 Pvu-Chr8 3782505 3786799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0446 80 419 Glycoside Hydrolase AT3G07070 51.989 1.50e-117 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu8g0446 Pkinase 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0446 - - gmx:100802866 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0290 4 2648982 2653890 Pvu8g0446 8 3782505 3786799 PCT