Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0442 ATGGAAATGATGAATGATAACATTATAGAGGTGAGCGTTGGGAAGAGCCAAACCTCCATGGCAGAAGGTGAGCTGCAAGCAACACGATCTGTCAAGAGACGAAGAAGAGAGGTTGGTGCAGCAGTCAGCAGCAGTGGTGACGATAACAACCAGCAGCAGTTATCAAAACAACATGCTGGTGAAAATTCTACAATCAACACAACAAAGAGAAGCTCAAAATTTCGTGGTGTTAGCAGACATAGGTGGACTGGTCGGTATGAAGCTCACTTGTGGGACAAACTCTCTTGGAACATAACACAGAAGAAAAAAGGGAAACAAGTTTACCTTGGGGCTTATGATGAAGAAGAATCCGCTGCCAGAGCATATGATTTAGCCGCACTTAAGTACTGGGGAACTTCAACTTTCACCAATTTTCCAATATCTGATTACGGGAAAGATATGGAAATAATGCAGACTATGACCAAAGAGGAGTATTTGGCCACTTTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTGTCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCAAGAATAGGAAGGGTTTTTGGAAACAAATATCTCTATCTTGGCACCTACGGCACACAAGAGGAAGCGGCACGAGCTTATGACTTAGCAGCCATTGAGTACAGAGGGATTAATGCTGTAACAAACTTTGATTTGAGCACTTACATAAAATGGTTAAAGCCTGGAGTAGGAAGCACCCCAGAAGCAAAACTTGAAGCACATGCAGTAGCAGAGGGTCAAAAGGTGGCATCCCCATCTAATTATGCTCTAACAGAAGACTCAAAATCTTCGGCCATTCACAACAGTTTTTTCAGTCTAGATTCTCTGGATTCCCCAGTAGGACAAGAAAATTTTGGAAATAAAACCTACTCATTCTCAAGCAGCAAGTCATCTTCTCCCACTGCACTTGGCCTTCTTCTCCGCTCTTCGTTGTTCAGAGAATTAGTTGAAAAAAATTCAAATGTATCTGGAGATGAAGCTGATGGGGAAGTTAGAAAGGGTGAACAGCCACAGATAGCTAGTGATGATGATCTTGGTGGAATCTTCTTTGACAGCATTGGTGATATCCCATTTGTCTGTGATCCCATTAGATACAACTTGGAATTGCAAGAAAGAGACCTGCAATCAATATTTTGA 1182 0.4247 MEMMNDNIIEVSVGKSQTSMAEGELQATRSVKRRRREVGAAVSSSGDDNNQQQLSKQHAGENSTINTTKRSSKFRGVSRHRWTGRYEAHLWDKLSWNITQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYGKDMEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDLAAIEYRGINAVTNFDLSTYIKWLKPGVGSTPEAKLEAHAVAEGQKVASPSNYALTEDSKSSAIHNSFFSLDSLDSPVGQENFGNKTYSFSSSKSSSPTALGLLLRSSLFRELVEKNSNVSGDEADGEVRKGEQPQIASDDDLGGIFFDSIGDIPFVCDPIRYNLELQERDLQSIF* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0442 393 MobiDBLite consensus disorder prediction 10 25 - -
Pvu8g0442 393 Pfam AP2 domain 174 225 IPR001471 GO:0003700|GO:0006355
Pvu8g0442 393 Pfam AP2 domain 72 131 IPR001471 GO:0003700|GO:0006355
Pvu8g0442 393 MobiDBLite consensus disorder prediction 337 358 - -
Pvu8g0442 393 SUPERFAMILY DNA-binding domain 174 235 IPR016177 GO:0003677
Pvu8g0442 393 CDD AP2 72 141 IPR001471 GO:0003700|GO:0006355
Pvu8g0442 393 CDD AP2 174 235 IPR001471 GO:0003700|GO:0006355
Pvu8g0442 393 ProSiteProfiles AP2/ERF domain profile. 73 139 IPR001471 GO:0003700|GO:0006355
Pvu8g0442 393 Gene3D AP2/ERF domain 72 141 IPR036955 GO:0003700|GO:0006355
Pvu8g0442 393 Gene3D AP2/ERF domain 174 235 IPR036955 GO:0003700|GO:0006355
Pvu8g0442 393 MobiDBLite consensus disorder prediction 337 354 - -
Pvu8g0442 393 MobiDBLite consensus disorder prediction 43 72 - -
Pvu8g0442 393 ProSiteProfiles AP2/ERF domain profile. 175 233 IPR001471 GO:0003700|GO:0006355
Pvu8g0442 393 SUPERFAMILY DNA-binding domain 72 141 IPR016177 GO:0003677
Pvu8g0442 393 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 368 - -
Pvu8g0442 393 MobiDBLite consensus disorder prediction 27 41 - -
Pvu8g0442 393 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 368 - -
Pvu8g0442 393 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Pvu8g0442 393 PRINTS Ethylene responsive element binding protein signature 215 235 IPR001471 GO:0003700|GO:0006355
Pvu8g0442 393 MobiDBLite consensus disorder prediction 1 76 - -
Pvu8g0442 393 SMART rav1_2 175 239 IPR001471 GO:0003700|GO:0006355
Pvu8g0442 393 SMART rav1_2 73 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0442 Pvu-Chr8 3742495 3745281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0442 69 237 AP2-EREBP Transcription Factor Family AT5G57390 69.231 1.73e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pvu8g0442 AP2 8.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0442 - - gmx:100792612 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0442 8 3742495 3745281 Pvu8g0442 8 3742495 3745281 ECH